Gene : Glyma.01G228900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11223 - EXPORTIN 1/5 Genomic Order:  2289
Name:  ? Glyma.01G228900 Secondary Identifier:  ? PAC:30542513
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G228900 0.5kb upstream 0.5kb upstream 13951 true Chr01: 55670765-55684715 Glycine max
Glyma.01G228900 0.5kb upstream 0.5kb upstream 500 false Chr01: 55670765-55671264 Glycine max
Glyma.01G228900 0.5kb downstream 0.5kb downstream 13951 true Chr01: 55671265-55685215 Glycine max
Glyma.01G228900 0.5kb downstream 0.5kb downstream 500 false Chr01: 55684716-55685215 Glycine max
Glyma.01G228900 1.0kb upstream 1.0kb upstream 14451 true Chr01: 55670265-55684715 Glycine max
Glyma.01G228900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55670265-55671264 Glycine max
Glyma.01G228900 1.0kb downstream 1.0kb downstream 14451 true Chr01: 55671265-55685715 Glycine max
Glyma.01G228900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55684716-55685715 Glycine max
Glyma.01G228900 2.0kb upstream 2.0kb upstream 15451 true Chr01: 55669265-55684715 Glycine max
Glyma.01G228900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55669265-55671264 Glycine max
Glyma.01G228900 2.0kb downstream 2.0kb downstream 15451 true Chr01: 55671265-55686715 Glycine max
Glyma.01G228900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55684716-55686715 Glycine max
Glyma.01G228900 5.0kb upstream 5.0kb upstream 18451 true Chr01: 55666265-55684715 Glycine max
Glyma.01G228900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55666265-55671264 Glycine max
Glyma.01G228900 5.0kb downstream 5.0kb downstream 18451 true Chr01: 55671265-55689715 Glycine max
Glyma.01G228900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55684716-55689715 Glycine max
Glyma.01G228900 10.0kb upstream 10.0kb upstream 23451 true Chr01: 55661265-55684715 Glycine max
Glyma.01G228900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55661265-55671264 Glycine max
Glyma.01G228900 10.0kb downstream 10.0kb downstream 23451 true Chr01: 55671265-55694715 Glycine max
Glyma.01G228900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55684716-55694715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617647 5273 Angiosperm View MSA
122253764 5265 Fabidae View MSA
123996224 5270 Rosid View MSA
123570739 5271 Pentapetalae View MSA
122605474 5272 Eudicot View MSA
120889792 5274 Embryophyte View MSA
123428212 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.50278 0.0 9.60755    
cufflinks 4.93147 0.0 13.2583   High
cufflinks 4.48588 0.0 12.0926    
cufflinks 3.57667 0.0 9.78439    
cufflinks 3.78032 0.0 10.3241    
cufflinks 2.5053 0.0 7.07724   Low
cufflinks 4.33894 0.0 11.754    
cufflinks 2.99907 0.0 8.32429   Low
cufflinks 3.82325 0.0 10.4188    
cufflinks 1.161        
cufflinks 0.425       Low
cufflinks 1.481        
cufflinks 1.919        
cufflinks 2.062       High
cufflinks 0.662       Low
cufflinks 1.555        
cufflinks 0.938        
cufflinks 1.943        
cufflinks 2.367       High
cufflinks 1.349        
cufflinks 0.505       Low
cufflinks 1.568        
cufflinks 2.131       High
cufflinks 0.526       Low
cufflinks 1.42        
cufflinks 0.703        

0 Strain