Gene : Glyma.18G278000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13634 - RIBOSOME BIOGENESIS PROTEIN BRIX Genomic Order:  2780
Name:  ? Glyma.18G278000 Secondary Identifier:  ? PAC:30554820
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G278000 0.5kb upstream 0.5kb upstream 4482 true Chr18: 55956758-55961239 Glycine max
Glyma.18G278000 0.5kb upstream 0.5kb upstream 500 false Chr18: 55960740-55961239 Glycine max
Glyma.18G278000 0.5kb downstream 0.5kb downstream 4482 true Chr18: 55956258-55960739 Glycine max
Glyma.18G278000 0.5kb downstream 0.5kb downstream 500 false Chr18: 55956258-55956757 Glycine max
Glyma.18G278000 1.0kb upstream 1.0kb upstream 4982 true Chr18: 55956758-55961739 Glycine max
Glyma.18G278000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55960740-55961739 Glycine max
Glyma.18G278000 1.0kb downstream 1.0kb downstream 4982 true Chr18: 55955758-55960739 Glycine max
Glyma.18G278000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55955758-55956757 Glycine max
Glyma.18G278000 2.0kb upstream 2.0kb upstream 5982 true Chr18: 55956758-55962739 Glycine max
Glyma.18G278000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55960740-55962739 Glycine max
Glyma.18G278000 2.0kb downstream 2.0kb downstream 5982 true Chr18: 55954758-55960739 Glycine max
Glyma.18G278000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55954758-55956757 Glycine max
Glyma.18G278000 5.0kb upstream 5.0kb upstream 8982 true Chr18: 55956758-55965739 Glycine max
Glyma.18G278000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55960740-55965739 Glycine max
Glyma.18G278000 5.0kb downstream 5.0kb downstream 8982 true Chr18: 55951758-55960739 Glycine max
Glyma.18G278000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55951758-55956757 Glycine max
Glyma.18G278000 10.0kb upstream 10.0kb upstream 13982 true Chr18: 55956758-55970739 Glycine max
Glyma.18G278000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55960740-55970739 Glycine max
Glyma.18G278000 10.0kb downstream 10.0kb downstream 13982 true Chr18: 55946758-55960739 Glycine max
Glyma.18G278000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55946758-55956757 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301161 5265 Fabidae View MSA
124066566 5270 Rosid View MSA
123743226 5271 Pentapetalae View MSA
122791953 5272 Eudicot View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00715 0.0 14.8342   High
cufflinks 2.7739 0.0 8.91908    
cufflinks 1.43859 0.0 4.99117   Low
cufflinks 2.40976 0.0 7.88245    
cufflinks 3.70381 0.0 11.4426    
cufflinks 2.443 0.0 7.99455    
cufflinks 2.01586 0.0 6.7752    
cufflinks 2.9731 0.0 9.45098    
cufflinks 2.09477 0.0 6.9883    
cufflinks 1.503        
cufflinks 0.46       Low
cufflinks 1.642        
cufflinks 3.256       High
cufflinks 3.776       High
cufflinks 0.782        
cufflinks 1.603        
cufflinks 0.966        
cufflinks 1.44        
cufflinks 2.611       High
cufflinks 1.503        
cufflinks 0.739       Low
cufflinks 1.715        
cufflinks 2.446        
cufflinks 0.542       Low
cufflinks 1.878        
cufflinks 0.751        

0 Strain