Gene : Glyma.18G284300 G. max Wm82.a2.v1
Defline:  (1 of 3) 4.1.2.27 - Sphinganine-1-phosphate aldolase / Sphingosine-1-phosphate lyase Genomic Order:  2843
Name:  ? Glyma.18G284300 Secondary Identifier:  ? PAC:30556649
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G284300 0.5kb upstream 0.5kb upstream 7660 true Chr18: 56489293-56496952 Glycine max
Glyma.18G284300 0.5kb upstream 0.5kb upstream 500 false Chr18: 56489293-56489792 Glycine max
Glyma.18G284300 0.5kb downstream 0.5kb downstream 7660 true Chr18: 56489793-56497452 Glycine max
Glyma.18G284300 0.5kb downstream 0.5kb downstream 500 false Chr18: 56496953-56497452 Glycine max
Glyma.18G284300 1.0kb upstream 1.0kb upstream 8160 true Chr18: 56488793-56496952 Glycine max
Glyma.18G284300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56488793-56489792 Glycine max
Glyma.18G284300 1.0kb downstream 1.0kb downstream 8160 true Chr18: 56489793-56497952 Glycine max
Glyma.18G284300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56496953-56497952 Glycine max
Glyma.18G284300 2.0kb upstream 2.0kb upstream 9160 true Chr18: 56487793-56496952 Glycine max
Glyma.18G284300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56487793-56489792 Glycine max
Glyma.18G284300 2.0kb downstream 2.0kb downstream 9160 true Chr18: 56489793-56498952 Glycine max
Glyma.18G284300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56496953-56498952 Glycine max
Glyma.18G284300 5.0kb upstream 5.0kb upstream 12160 true Chr18: 56484793-56496952 Glycine max
Glyma.18G284300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56484793-56489792 Glycine max
Glyma.18G284300 5.0kb downstream 5.0kb downstream 12160 true Chr18: 56489793-56501952 Glycine max
Glyma.18G284300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56496953-56501952 Glycine max
Glyma.18G284300 10.0kb upstream 10.0kb upstream 17160 true Chr18: 56479793-56496952 Glycine max
Glyma.18G284300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56479793-56489792 Glycine max
Glyma.18G284300 10.0kb downstream 10.0kb downstream 17160 true Chr18: 56489793-56506952 Glycine max
Glyma.18G284300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56496953-56506952 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304242 5265 Fabidae View MSA
124066752 5270 Rosid View MSA
123742910 5271 Pentapetalae View MSA
122789301 5272 Eudicot View MSA
122050571 5273 Angiosperm View MSA
121350243 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2236 0.0 43.2949    
cufflinks 9.64738 0.0 25.9916    
cufflinks 195.621 0.0 750.767 High High
cufflinks 15.9716 0.0 42.6193    
cufflinks 12.3011 0.0 32.8884    
cufflinks 24.0907 0.0 65.0444 High  
cufflinks 26.7402 0.0 72.5091 High  
cufflinks 16.5851 0.0 44.2716    
cufflinks 18.0267 0.0 48.1844    
cufflinks 4.048        
cufflinks 16.774     High High
cufflinks 31.327     High High
cufflinks 3.624        
cufflinks 2.72        
cufflinks 19.04     High High
cufflinks 2.735        
cufflinks 4.209        
cufflinks 4.625        
cufflinks 3.062        
cufflinks 3.385        
cufflinks 7.058     High  
cufflinks 2.893        
cufflinks 1.898       Low
cufflinks 12.724     High High
cufflinks 3.067        
cufflinks 5.992        

0 Strain