Gene : Glyma.02G055200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10992:SF701 - SERINE HYDROLASE-RELATED Genomic Order:  552
Name:  ? Glyma.02G055200 Secondary Identifier:  ? PAC:30506518
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G055200 0.5kb upstream 0.5kb upstream 3760 true Chr02: 4994240-4997999 Glycine max
Glyma.02G055200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4997500-4997999 Glycine max
Glyma.02G055200 0.5kb downstream 0.5kb downstream 3760 true Chr02: 4993740-4997499 Glycine max
Glyma.02G055200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4993740-4994239 Glycine max
Glyma.02G055200 1.0kb upstream 1.0kb upstream 4260 true Chr02: 4994240-4998499 Glycine max
Glyma.02G055200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4997500-4998499 Glycine max
Glyma.02G055200 1.0kb downstream 1.0kb downstream 4260 true Chr02: 4993240-4997499 Glycine max
Glyma.02G055200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4993240-4994239 Glycine max
Glyma.02G055200 2.0kb upstream 2.0kb upstream 5260 true Chr02: 4994240-4999499 Glycine max
Glyma.02G055200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4997500-4999499 Glycine max
Glyma.02G055200 2.0kb downstream 2.0kb downstream 5260 true Chr02: 4992240-4997499 Glycine max
Glyma.02G055200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4992240-4994239 Glycine max
Glyma.02G055200 5.0kb upstream 5.0kb upstream 8260 true Chr02: 4994240-5002499 Glycine max
Glyma.02G055200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4997500-5002499 Glycine max
Glyma.02G055200 5.0kb downstream 5.0kb downstream 8260 true Chr02: 4989240-4997499 Glycine max
Glyma.02G055200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4989240-4994239 Glycine max
Glyma.02G055200 10.0kb upstream 10.0kb upstream 13260 true Chr02: 4994240-5007499 Glycine max
Glyma.02G055200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4997500-5007499 Glycine max
Glyma.02G055200 10.0kb downstream 10.0kb downstream 13260 true Chr02: 4984240-4997499 Glycine max
Glyma.02G055200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4984240-4994239 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121609676 5273 Angiosperm Singleton cluster - no MSA
122242003 5265 Fabidae Singleton cluster - no MSA
123986773 5270 Rosid Singleton cluster - no MSA
123562099 5271 Pentapetalae Singleton cluster - no MSA
122596887 5272 Eudicot Singleton cluster - no MSA
120881926 5274 Embryophyte Singleton cluster - no MSA
122922771 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.2355 0.0 71.3254   Low
cufflinks 0.727771 0.0 79.7531    
cufflinks 0.487981 0.0 44.4759    
cufflinks 3.37692 0.0 101.865    
cufflinks 0.610457 0.0 6.60975    
cufflinks 20.196 0.0 156.938   High
cufflinks 0.809512 0.0 8.56734    
cufflinks 2.32471 0.0 127.341    
cufflinks 0.657649 0.0 67.0784    
cufflinks 0.142       High
cufflinks 0.043     Low  
cufflinks 0.085     Low  
cufflinks 0.148       High
cufflinks 0.057     Low  
cufflinks 0.028     Low Low
cufflinks 0.087     Low  
cufflinks 0.026     Low Low
cufflinks 0.125       High
cufflinks 0.088     Low  
cufflinks 0.056     Low  
cufflinks 0.035     Low Low
cufflinks 0.06     Low  
cufflinks 0.036     Low Low
cufflinks 0.045     Low  
cufflinks 0.084     Low  
cufflinks 0.084        

0 Strain