Gene : Glyma.01G082400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31917:SF9 - AGENET DOMAIN-CONTAINING PROTEIN / BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN Genomic Order:  824
Name:  ? Glyma.01G082400 Secondary Identifier:  ? PAC:30543757
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G082400 0.5kb upstream 0.5kb upstream 3853 true Chr01: 24014866-24018718 Glycine max
Glyma.01G082400 0.5kb upstream 0.5kb upstream 500 false Chr01: 24014866-24015365 Glycine max
Glyma.01G082400 0.5kb downstream 0.5kb downstream 3853 true Chr01: 24015366-24019218 Glycine max
Glyma.01G082400 0.5kb downstream 0.5kb downstream 500 false Chr01: 24018719-24019218 Glycine max
Glyma.01G082400 1.0kb upstream 1.0kb upstream 4353 true Chr01: 24014366-24018718 Glycine max
Glyma.01G082400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 24014366-24015365 Glycine max
Glyma.01G082400 1.0kb downstream 1.0kb downstream 4353 true Chr01: 24015366-24019718 Glycine max
Glyma.01G082400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 24018719-24019718 Glycine max
Glyma.01G082400 2.0kb upstream 2.0kb upstream 5353 true Chr01: 24013366-24018718 Glycine max
Glyma.01G082400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 24013366-24015365 Glycine max
Glyma.01G082400 2.0kb downstream 2.0kb downstream 5353 true Chr01: 24015366-24020718 Glycine max
Glyma.01G082400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 24018719-24020718 Glycine max
Glyma.01G082400 5.0kb upstream 5.0kb upstream 8353 true Chr01: 24010366-24018718 Glycine max
Glyma.01G082400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 24010366-24015365 Glycine max
Glyma.01G082400 5.0kb downstream 5.0kb downstream 8353 true Chr01: 24015366-24023718 Glycine max
Glyma.01G082400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 24018719-24023718 Glycine max
Glyma.01G082400 10.0kb upstream 10.0kb upstream 13353 true Chr01: 24005366-24018718 Glycine max
Glyma.01G082400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 24005366-24015365 Glycine max
Glyma.01G082400 10.0kb downstream 10.0kb downstream 13353 true Chr01: 24015366-24028718 Glycine max
Glyma.01G082400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 24018719-24028718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314264 5265 Fabidae View MSA
124073290 5270 Rosid View MSA
123738159 5271 Pentapetalae View MSA
122792230 5272 Eudicot View MSA
122049413 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.6679 0.0 238.691 High High
cufflinks 11.8948 0.0 41.8356    
cufflinks 46.1521 0.0 178.98 High High
cufflinks 13.7497 0.0 49.9568    
cufflinks 17.7361 0.0 63.3246    
cufflinks 22.5844 0.0 82.0325    
cufflinks 10.2731 0.0 37.6106   Low
cufflinks 24.1201 0.0 91.0577 High  
cufflinks 18.5248 0.0 66.7445    
cufflinks 17.751     High  
cufflinks 49.337     High High
cufflinks 22.444     High  
cufflinks 10.975     High  
cufflinks 9.661     High Low
cufflinks 47.399     High High
cufflinks 13.103     High  
cufflinks 26.492     High  
cufflinks 14.394     High  
cufflinks 10.101     High Low
cufflinks 11.4     High  
cufflinks 45.977     High High
cufflinks 13.652     High  
cufflinks 15.482     High  
cufflinks 40.575     High High
cufflinks 11.059     High  
cufflinks 40.632     High High

0 Strain