Gene : Glyma.01G074700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12084 - NUCLEAR PORE GLYCOPROTEIN P62-RELATED Genomic Order:  747
Name:  ? Glyma.01G074700 Secondary Identifier:  ? PAC:30543925
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G074700 0.5kb upstream 0.5kb upstream 28091 true Chr01: 16519441-16547531 Glycine max
Glyma.01G074700 0.5kb upstream 0.5kb upstream 500 false Chr01: 16519441-16519940 Glycine max
Glyma.01G074700 0.5kb downstream 0.5kb downstream 28091 true Chr01: 16519941-16548031 Glycine max
Glyma.01G074700 0.5kb downstream 0.5kb downstream 500 false Chr01: 16547532-16548031 Glycine max
Glyma.01G074700 1.0kb upstream 1.0kb upstream 28591 true Chr01: 16518941-16547531 Glycine max
Glyma.01G074700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 16518941-16519940 Glycine max
Glyma.01G074700 1.0kb downstream 1.0kb downstream 28591 true Chr01: 16519941-16548531 Glycine max
Glyma.01G074700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 16547532-16548531 Glycine max
Glyma.01G074700 2.0kb upstream 2.0kb upstream 29591 true Chr01: 16517941-16547531 Glycine max
Glyma.01G074700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 16517941-16519940 Glycine max
Glyma.01G074700 2.0kb downstream 2.0kb downstream 29591 true Chr01: 16519941-16549531 Glycine max
Glyma.01G074700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 16547532-16549531 Glycine max
Glyma.01G074700 5.0kb upstream 5.0kb upstream 32591 true Chr01: 16514941-16547531 Glycine max
Glyma.01G074700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 16514941-16519940 Glycine max
Glyma.01G074700 5.0kb downstream 5.0kb downstream 32591 true Chr01: 16519941-16552531 Glycine max
Glyma.01G074700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 16547532-16552531 Glycine max
Glyma.01G074700 10.0kb upstream 10.0kb upstream 37591 true Chr01: 16509941-16547531 Glycine max
Glyma.01G074700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 16509941-16519940 Glycine max
Glyma.01G074700 10.0kb downstream 10.0kb downstream 37591 true Chr01: 16519941-16557531 Glycine max
Glyma.01G074700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16547532-16557531 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310563 5265 Fabidae View MSA
124066082 5270 Rosid View MSA
123740016 5271 Pentapetalae View MSA
122794564 5272 Eudicot View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.57282 0.0 15.3212    
cufflinks 6.79555 0.0 18.4515    
cufflinks 3.36601 0.0 9.79296   Low
cufflinks 8.70509 0.0 23.3617   High
cufflinks 7.32861 0.0 19.7767    
cufflinks 2.59427 0.0 7.75491   Low
cufflinks 4.9407 0.0 13.7178    
cufflinks 7.72697 0.0 20.8251    
cufflinks 6.04827 0.0 16.5197    
cufflinks 0.513        
cufflinks 0.245       Low
cufflinks 0.442        
cufflinks 0.562        
cufflinks 0.694       High
cufflinks 0.458        
cufflinks 0.618        
cufflinks 0.539        
cufflinks 0.478        
cufflinks 0.681        
cufflinks 0.549        
cufflinks 0.294       Low
cufflinks 0.518        
cufflinks 0.695       High
cufflinks 0.174       Low
cufflinks 0.523        
cufflinks 0.45        

0 Strain