Gene : Glyma.01G029200 G. max Wm82.a2.v1
Defline:  (1 of 4) PF01599 - Ribosomal protein S27a (Ribosomal_S27) Genomic Order:  292
Name:  ? Glyma.01G029200 Secondary Identifier:  ? PAC:30542787
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G029200 0.5kb upstream 0.5kb upstream 1969 true Chr01: 3098201-3100169 Glycine max
Glyma.01G029200 0.5kb upstream 0.5kb upstream 500 false Chr01: 3098201-3098700 Glycine max
Glyma.01G029200 0.5kb downstream 0.5kb downstream 1969 true Chr01: 3098701-3100669 Glycine max
Glyma.01G029200 0.5kb downstream 0.5kb downstream 500 false Chr01: 3100170-3100669 Glycine max
Glyma.01G029200 1.0kb upstream 1.0kb upstream 2469 true Chr01: 3097701-3100169 Glycine max
Glyma.01G029200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3097701-3098700 Glycine max
Glyma.01G029200 1.0kb downstream 1.0kb downstream 2469 true Chr01: 3098701-3101169 Glycine max
Glyma.01G029200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3100170-3101169 Glycine max
Glyma.01G029200 2.0kb upstream 2.0kb upstream 3469 true Chr01: 3096701-3100169 Glycine max
Glyma.01G029200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3096701-3098700 Glycine max
Glyma.01G029200 2.0kb downstream 2.0kb downstream 3469 true Chr01: 3098701-3102169 Glycine max
Glyma.01G029200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3100170-3102169 Glycine max
Glyma.01G029200 5.0kb upstream 5.0kb upstream 6469 true Chr01: 3093701-3100169 Glycine max
Glyma.01G029200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3093701-3098700 Glycine max
Glyma.01G029200 5.0kb downstream 5.0kb downstream 6469 true Chr01: 3098701-3105169 Glycine max
Glyma.01G029200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3100170-3105169 Glycine max
Glyma.01G029200 10.0kb upstream 10.0kb upstream 11469 true Chr01: 3088701-3100169 Glycine max
Glyma.01G029200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3088701-3098700 Glycine max
Glyma.01G029200 10.0kb downstream 10.0kb downstream 11469 true Chr01: 3098701-3110169 Glycine max
Glyma.01G029200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3100170-3110169 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306613 5265 Fabidae View MSA
124071954 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.4468 0.0 243.455 High  
cufflinks 116.155 0.0 356.533 High  
cufflinks 44.1521 0.0 120.11 High Low
cufflinks 79.8176 0.0 231.635 High  
cufflinks 191.893 0.0 657.28 High High
cufflinks 118.086 0.0 365.072 High  
cufflinks 254.177 0.0 929.421 High High
cufflinks 106.091 0.0 321.669 High  
cufflinks 110.284 0.0 337.08 High  
cufflinks 71.112     High  
cufflinks 27.53     High Low
cufflinks 45.292     High  
cufflinks 133.734     High High
cufflinks 202.918     High High
cufflinks 21.41     High Low
cufflinks 50.091     High  
cufflinks 39.811     High  
cufflinks 48.945     High  
cufflinks 86.727     High  
cufflinks 38.801     High  
cufflinks 33.887     High  
cufflinks 40.347     High  
cufflinks 57.247     High  
cufflinks 34.372     High  
cufflinks 42.407     High  
cufflinks 46.836     High  

0 Strain