Gene : Glyma.01G152700 G. max Wm82.a2.v1
Defline:  (1 of 4) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  1527
Name:  ? Glyma.01G152700 Secondary Identifier:  ? PAC:30542087
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G152700 0.5kb upstream 0.5kb upstream 4414 true Chr01: 48962651-48967064 Glycine max
Glyma.01G152700 0.5kb upstream 0.5kb upstream 500 false Chr01: 48962651-48963150 Glycine max
Glyma.01G152700 0.5kb downstream 0.5kb downstream 4414 true Chr01: 48963151-48967564 Glycine max
Glyma.01G152700 0.5kb downstream 0.5kb downstream 500 false Chr01: 48967065-48967564 Glycine max
Glyma.01G152700 1.0kb upstream 1.0kb upstream 4914 true Chr01: 48962151-48967064 Glycine max
Glyma.01G152700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48962151-48963150 Glycine max
Glyma.01G152700 1.0kb downstream 1.0kb downstream 4914 true Chr01: 48963151-48968064 Glycine max
Glyma.01G152700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48967065-48968064 Glycine max
Glyma.01G152700 2.0kb upstream 2.0kb upstream 5914 true Chr01: 48961151-48967064 Glycine max
Glyma.01G152700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48961151-48963150 Glycine max
Glyma.01G152700 2.0kb downstream 2.0kb downstream 5914 true Chr01: 48963151-48969064 Glycine max
Glyma.01G152700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48967065-48969064 Glycine max
Glyma.01G152700 5.0kb upstream 5.0kb upstream 8914 true Chr01: 48958151-48967064 Glycine max
Glyma.01G152700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48958151-48963150 Glycine max
Glyma.01G152700 5.0kb downstream 5.0kb downstream 8914 true Chr01: 48963151-48972064 Glycine max
Glyma.01G152700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48967065-48972064 Glycine max
Glyma.01G152700 10.0kb upstream 10.0kb upstream 13914 true Chr01: 48953151-48967064 Glycine max
Glyma.01G152700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48953151-48963150 Glycine max
Glyma.01G152700 10.0kb downstream 10.0kb downstream 13914 true Chr01: 48963151-48977064 Glycine max
Glyma.01G152700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48967065-48977064 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303179 5265 Fabidae View MSA
124061813 5270 Rosid View MSA
123738693 5271 Pentapetalae View MSA
122789368 5272 Eudicot View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.36662 0.0 37.0542   High
cufflinks 1.95472 0.0 13.7315    
cufflinks 3.20299 0.0 20.0421    
cufflinks 5.44361 0.0 28.0661    
cufflinks 1.92601 0.0 13.7853    
cufflinks 0.459926 0.0 2.1989   Low
cufflinks 2.34243 0.0 12.5567    
cufflinks 3.86713 0.0 18.8769    
cufflinks 1.25173 0.0 7.85101    
cufflinks 0.115        
cufflinks 0.007     Low Low
cufflinks 0.161        
cufflinks 0.092     Low  
cufflinks 0.107        
cufflinks 0.016     Low Low
cufflinks 0.429       High
cufflinks 0.018     Low Low
cufflinks 0.238        
cufflinks 0.081     Low  
cufflinks 0.738       High
cufflinks 0.017     Low Low
cufflinks 0.487       High
cufflinks 0.2        
cufflinks 0.013     Low Low
cufflinks 0.619       High
cufflinks 0.017     Low Low

0 Strain