Gene : Glyma.01G103100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11624:SF21 - 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIAL Genomic Order:  1031
Name:  ? Glyma.01G103100 Secondary Identifier:  ? PAC:30543600
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5046 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G103100 0.5kb upstream 0.5kb upstream 6477 true Chr01: 34422237-34428713 Glycine max
Glyma.01G103100 0.5kb upstream 0.5kb upstream 500 false Chr01: 34428214-34428713 Glycine max
Glyma.01G103100 0.5kb downstream 0.5kb downstream 6477 true Chr01: 34421737-34428213 Glycine max
Glyma.01G103100 0.5kb downstream 0.5kb downstream 500 false Chr01: 34421737-34422236 Glycine max
Glyma.01G103100 1.0kb upstream 1.0kb upstream 6977 true Chr01: 34422237-34429213 Glycine max
Glyma.01G103100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34428214-34429213 Glycine max
Glyma.01G103100 1.0kb downstream 1.0kb downstream 6977 true Chr01: 34421237-34428213 Glycine max
Glyma.01G103100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34421237-34422236 Glycine max
Glyma.01G103100 2.0kb upstream 2.0kb upstream 7977 true Chr01: 34422237-34430213 Glycine max
Glyma.01G103100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34428214-34430213 Glycine max
Glyma.01G103100 2.0kb downstream 2.0kb downstream 7977 true Chr01: 34420237-34428213 Glycine max
Glyma.01G103100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34420237-34422236 Glycine max
Glyma.01G103100 5.0kb upstream 5.0kb upstream 10977 true Chr01: 34422237-34433213 Glycine max
Glyma.01G103100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34428214-34433213 Glycine max
Glyma.01G103100 5.0kb downstream 5.0kb downstream 10977 true Chr01: 34417237-34428213 Glycine max
Glyma.01G103100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34417237-34422236 Glycine max
Glyma.01G103100 10.0kb upstream 10.0kb upstream 15977 true Chr01: 34422237-34438213 Glycine max
Glyma.01G103100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34428214-34438213 Glycine max
Glyma.01G103100 10.0kb downstream 10.0kb downstream 15977 true Chr01: 34412237-34428213 Glycine max
Glyma.01G103100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34412237-34422236 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309048 5265 Fabidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.41782 0.0 7.93491   Low
cufflinks 6.9241 0.0 19.6915    
cufflinks 14.2536 0.0 38.2843   High
cufflinks 8.85718 0.0 24.5341    
cufflinks 7.69461 0.0 21.6448    
cufflinks 8.24475 0.0 22.9894    
cufflinks 3.6927 0.0 11.4336   Low
cufflinks 7.96414 0.0 22.3064    
cufflinks 6.04083 0.0 17.4423    
cufflinks 2.491        
cufflinks 3.33        
cufflinks 4.157       High
cufflinks 2.668        
cufflinks 3.325        
cufflinks 2.941        
cufflinks 2.064        
cufflinks 0.997       Low
cufflinks 4.328       High
cufflinks 2.711        
cufflinks 2.823        
cufflinks 2.456        
cufflinks 1.77        
cufflinks 1.25       Low
cufflinks 3.407        
cufflinks 2.816        
cufflinks 2.216        

0 Strain