Gene : Glyma.01G194600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Genomic Order:  1946
Name:  ? Glyma.01G194600 Secondary Identifier:  ? PAC:30543167
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G194600 0.5kb upstream 0.5kb upstream 7898 true Chr01: 52875199-52883096 Glycine max
Glyma.01G194600 0.5kb upstream 0.5kb upstream 500 false Chr01: 52882597-52883096 Glycine max
Glyma.01G194600 0.5kb downstream 0.5kb downstream 7898 true Chr01: 52874699-52882596 Glycine max
Glyma.01G194600 0.5kb downstream 0.5kb downstream 500 false Chr01: 52874699-52875198 Glycine max
Glyma.01G194600 1.0kb upstream 1.0kb upstream 8398 true Chr01: 52875199-52883596 Glycine max
Glyma.01G194600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52882597-52883596 Glycine max
Glyma.01G194600 1.0kb downstream 1.0kb downstream 8398 true Chr01: 52874199-52882596 Glycine max
Glyma.01G194600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52874199-52875198 Glycine max
Glyma.01G194600 2.0kb upstream 2.0kb upstream 9398 true Chr01: 52875199-52884596 Glycine max
Glyma.01G194600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52882597-52884596 Glycine max
Glyma.01G194600 2.0kb downstream 2.0kb downstream 9398 true Chr01: 52873199-52882596 Glycine max
Glyma.01G194600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52873199-52875198 Glycine max
Glyma.01G194600 5.0kb upstream 5.0kb upstream 12398 true Chr01: 52875199-52887596 Glycine max
Glyma.01G194600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52882597-52887596 Glycine max
Glyma.01G194600 5.0kb downstream 5.0kb downstream 12398 true Chr01: 52870199-52882596 Glycine max
Glyma.01G194600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52870199-52875198 Glycine max
Glyma.01G194600 10.0kb upstream 10.0kb upstream 17398 true Chr01: 52875199-52892596 Glycine max
Glyma.01G194600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52882597-52892596 Glycine max
Glyma.01G194600 10.0kb downstream 10.0kb downstream 17398 true Chr01: 52865199-52882596 Glycine max
Glyma.01G194600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52865199-52875198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309992 5265 Fabidae View MSA
124073708 5270 Rosid View MSA
123739242 5271 Pentapetalae View MSA
122787405 5272 Eudicot View MSA
122045775 5273 Angiosperm View MSA
121350383 5274 Embryophyte View MSA
123425799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.42383 0.0 20.3154    
cufflinks 5.39364 0.0 23.8269    
cufflinks 5.05491 0.0 19.3611    
cufflinks 8.20966 0.0 32.3803   High
cufflinks 3.36967 0.0 15.0152   Low
cufflinks 3.80167 0.0 16.4412   Low
cufflinks 7.19599 0.0 28.2923   High
cufflinks 6.00195 0.0 25.5184    
cufflinks 4.78338 0.0 21.3109    
cufflinks 0.724        
cufflinks 0.565        
cufflinks 0.814        
cufflinks 0.619        
cufflinks 0.557        
cufflinks 0.417       Low
cufflinks 0.748        
cufflinks 0.575        
cufflinks 1.003       High
cufflinks 0.833        
cufflinks 0.862        
cufflinks 0.624        
cufflinks 0.843        
cufflinks 0.815        
cufflinks 0.688        
cufflinks 0.781        
cufflinks 0.511       Low

0 Strain