Gene : Glyma.01G004200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10509//PTHR10509:SF29 - O-METHYLTRANSFERASE-RELATED Genomic Order:  42
Name:  ? Glyma.01G004200 Secondary Identifier:  ? PAC:30544363
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G004200 0.5kb upstream 0.5kb upstream 2803 true Chr01: 424898-427700 Glycine max
Glyma.01G004200 0.5kb upstream 0.5kb upstream 500 false Chr01: 424898-425397 Glycine max
Glyma.01G004200 0.5kb downstream 0.5kb downstream 2803 true Chr01: 425398-428200 Glycine max
Glyma.01G004200 0.5kb downstream 0.5kb downstream 500 false Chr01: 427701-428200 Glycine max
Glyma.01G004200 1.0kb upstream 1.0kb upstream 3303 true Chr01: 424398-427700 Glycine max
Glyma.01G004200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 424398-425397 Glycine max
Glyma.01G004200 1.0kb downstream 1.0kb downstream 3303 true Chr01: 425398-428700 Glycine max
Glyma.01G004200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 427701-428700 Glycine max
Glyma.01G004200 2.0kb upstream 2.0kb upstream 4303 true Chr01: 423398-427700 Glycine max
Glyma.01G004200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 423398-425397 Glycine max
Glyma.01G004200 2.0kb downstream 2.0kb downstream 4303 true Chr01: 425398-429700 Glycine max
Glyma.01G004200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 427701-429700 Glycine max
Glyma.01G004200 5.0kb upstream 5.0kb upstream 7303 true Chr01: 420398-427700 Glycine max
Glyma.01G004200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 420398-425397 Glycine max
Glyma.01G004200 5.0kb downstream 5.0kb downstream 7303 true Chr01: 425398-432700 Glycine max
Glyma.01G004200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 427701-432700 Glycine max
Glyma.01G004200 10.0kb upstream 10.0kb upstream 12303 true Chr01: 415398-427700 Glycine max
Glyma.01G004200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 415398-425397 Glycine max
Glyma.01G004200 10.0kb downstream 10.0kb downstream 12303 true Chr01: 425398-437700 Glycine max
Glyma.01G004200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 427701-437700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314949 5265 Fabidae View MSA
124070229 5270 Rosid View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 130.256 0.0 634.69 High High
cufflinks 0.383246 0.0 2.69402   Low
cufflinks 46.2585 0.0 177.628 High  
cufflinks 0.996132 0.0 7.52634   Low
cufflinks 8.96712 0.0 40.4398    
cufflinks 52.9484 0.0 204.05 High  
cufflinks 12.2444 0.0 50.3151    
cufflinks 2.80242 0.0 16.1572    
cufflinks 5.07194 0.0 28.045    
cufflinks 0.795        
cufflinks 7.366     High  
cufflinks 2.91        
cufflinks 1.357        
cufflinks 1.829        
cufflinks 5.754     High  
cufflinks 2.351        
cufflinks 8.527     High High
cufflinks 0.167       Low
cufflinks 0.678       Low
cufflinks 1.085        
cufflinks 7.316     High  
cufflinks 6.835        
cufflinks 1.481        
cufflinks 8.0     High High
cufflinks 1.453        
cufflinks 6.516     High  

0 Strain