Gene : Glyma.01G210400 G. max Wm82.a2.v1
Defline:  (1 of 4) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  2104
Name:  ? Glyma.01G210400 Secondary Identifier:  ? PAC:30542792
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax PWY-5481 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G210400 0.5kb upstream 0.5kb upstream 2713 true Chr01: 54169859-54172571 Glycine max
Glyma.01G210400 0.5kb upstream 0.5kb upstream 500 false Chr01: 54169859-54170358 Glycine max
Glyma.01G210400 0.5kb downstream 0.5kb downstream 2713 true Chr01: 54170359-54173071 Glycine max
Glyma.01G210400 0.5kb downstream 0.5kb downstream 500 false Chr01: 54172572-54173071 Glycine max
Glyma.01G210400 1.0kb upstream 1.0kb upstream 3213 true Chr01: 54169359-54172571 Glycine max
Glyma.01G210400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54169359-54170358 Glycine max
Glyma.01G210400 1.0kb downstream 1.0kb downstream 3213 true Chr01: 54170359-54173571 Glycine max
Glyma.01G210400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54172572-54173571 Glycine max
Glyma.01G210400 2.0kb upstream 2.0kb upstream 4213 true Chr01: 54168359-54172571 Glycine max
Glyma.01G210400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54168359-54170358 Glycine max
Glyma.01G210400 2.0kb downstream 2.0kb downstream 4213 true Chr01: 54170359-54174571 Glycine max
Glyma.01G210400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54172572-54174571 Glycine max
Glyma.01G210400 5.0kb upstream 5.0kb upstream 7213 true Chr01: 54165359-54172571 Glycine max
Glyma.01G210400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54165359-54170358 Glycine max
Glyma.01G210400 5.0kb downstream 5.0kb downstream 7213 true Chr01: 54170359-54177571 Glycine max
Glyma.01G210400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54172572-54177571 Glycine max
Glyma.01G210400 10.0kb upstream 10.0kb upstream 12213 true Chr01: 54160359-54172571 Glycine max
Glyma.01G210400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54160359-54170358 Glycine max
Glyma.01G210400 10.0kb downstream 10.0kb downstream 12213 true Chr01: 54170359-54182571 Glycine max
Glyma.01G210400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54172572-54182571 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302762 5265 Fabidae View MSA
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.67595 0.0 6.73346    
cufflinks 0.836437 0.0 3.80405    
cufflinks 0.891764 0.0 4.01938    
cufflinks 0.0802812 0.0 0.324344 Low Low
cufflinks 6.21279 0.0 25.2328   High
cufflinks 1.43558 0.0 6.22069    
cufflinks 0.0141361 0.0 0.0725452 Low Low
cufflinks 0.241459 0.0 1.17584    
cufflinks 1.22511 0.0 6.82956    
cufflinks 0.218        
cufflinks 32.156     High High
cufflinks 0.278        
cufflinks 0.238        
cufflinks 0.357        
cufflinks 5.37     High  
cufflinks 0.367        
cufflinks 7.872     High  
cufflinks 0.055     Low Low
cufflinks 0.707        
cufflinks 0.518        
cufflinks 140.368     High High
cufflinks 0.397        
cufflinks 0.537        
cufflinks 43.202     High High
cufflinks 0.25        
cufflinks 120.689     High High

0 Strain