Gene : Glyma.18G214800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11206:SF124 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  2148
Name:  ? Glyma.18G214800 Secondary Identifier:  ? PAC:30557262
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G214800 0.5kb upstream 0.5kb upstream 5553 true Chr18: 50165772-50171324 Glycine max
Glyma.18G214800 0.5kb upstream 0.5kb upstream 500 false Chr18: 50170825-50171324 Glycine max
Glyma.18G214800 0.5kb downstream 0.5kb downstream 5553 true Chr18: 50165272-50170824 Glycine max
Glyma.18G214800 0.5kb downstream 0.5kb downstream 500 false Chr18: 50165272-50165771 Glycine max
Glyma.18G214800 1.0kb upstream 1.0kb upstream 6053 true Chr18: 50165772-50171824 Glycine max
Glyma.18G214800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50170825-50171824 Glycine max
Glyma.18G214800 1.0kb downstream 1.0kb downstream 6053 true Chr18: 50164772-50170824 Glycine max
Glyma.18G214800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50164772-50165771 Glycine max
Glyma.18G214800 2.0kb upstream 2.0kb upstream 7053 true Chr18: 50165772-50172824 Glycine max
Glyma.18G214800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50170825-50172824 Glycine max
Glyma.18G214800 2.0kb downstream 2.0kb downstream 7053 true Chr18: 50163772-50170824 Glycine max
Glyma.18G214800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50163772-50165771 Glycine max
Glyma.18G214800 5.0kb upstream 5.0kb upstream 10053 true Chr18: 50165772-50175824 Glycine max
Glyma.18G214800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50170825-50175824 Glycine max
Glyma.18G214800 5.0kb downstream 5.0kb downstream 10053 true Chr18: 50160772-50170824 Glycine max
Glyma.18G214800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50160772-50165771 Glycine max
Glyma.18G214800 10.0kb upstream 10.0kb upstream 15053 true Chr18: 50165772-50180824 Glycine max
Glyma.18G214800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50170825-50180824 Glycine max
Glyma.18G214800 10.0kb downstream 10.0kb downstream 15053 true Chr18: 50155772-50170824 Glycine max
Glyma.18G214800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50155772-50165771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310424 5265 Fabidae View MSA
124073012 5270 Rosid View MSA
123743812 5271 Pentapetalae View MSA
122793892 5272 Eudicot View MSA
122051915 5273 Angiosperm View MSA
121312795 5274 Embryophyte View MSA
123349936 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.169489 0.0 0.65919 Low Low
cufflinks 1.96074 0.0 6.96078    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.11436 0.0 9.75163    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138       High
cufflinks 0.17       High
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  

0 Strain