Gene : Glyma.18G176300 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  1763
Name:  ? Glyma.18G176300 Secondary Identifier:  ? PAC:30556151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G176300 0.5kb upstream 0.5kb upstream 2388 true Chr18: 42036805-42039192 Glycine max
Glyma.18G176300 0.5kb upstream 0.5kb upstream 500 false Chr18: 42036805-42037304 Glycine max
Glyma.18G176300 0.5kb downstream 0.5kb downstream 2388 true Chr18: 42037305-42039692 Glycine max
Glyma.18G176300 0.5kb downstream 0.5kb downstream 500 false Chr18: 42039193-42039692 Glycine max
Glyma.18G176300 1.0kb upstream 1.0kb upstream 2888 true Chr18: 42036305-42039192 Glycine max
Glyma.18G176300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 42036305-42037304 Glycine max
Glyma.18G176300 1.0kb downstream 1.0kb downstream 2888 true Chr18: 42037305-42040192 Glycine max
Glyma.18G176300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 42039193-42040192 Glycine max
Glyma.18G176300 2.0kb upstream 2.0kb upstream 3888 true Chr18: 42035305-42039192 Glycine max
Glyma.18G176300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 42035305-42037304 Glycine max
Glyma.18G176300 2.0kb downstream 2.0kb downstream 3888 true Chr18: 42037305-42041192 Glycine max
Glyma.18G176300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 42039193-42041192 Glycine max
Glyma.18G176300 5.0kb upstream 5.0kb upstream 6888 true Chr18: 42032305-42039192 Glycine max
Glyma.18G176300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 42032305-42037304 Glycine max
Glyma.18G176300 5.0kb downstream 5.0kb downstream 6888 true Chr18: 42037305-42044192 Glycine max
Glyma.18G176300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 42039193-42044192 Glycine max
Glyma.18G176300 10.0kb upstream 10.0kb upstream 11888 true Chr18: 42027305-42039192 Glycine max
Glyma.18G176300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 42027305-42037304 Glycine max
Glyma.18G176300 10.0kb downstream 10.0kb downstream 11888 true Chr18: 42037305-42049192 Glycine max
Glyma.18G176300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 42039193-42049192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312837 5265 Fabidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.6241 0.0 2.28316   Low
cufflinks 2.21814 0.0 7.25155    
cufflinks 2.96018 0.0 9.3042   High
cufflinks 0.52284 0.0 1.93191   Low
cufflinks 1.98931 0.0 6.55911    
cufflinks 1.10869 0.0 3.89787    
cufflinks 0.814296 0.0 2.92505    
cufflinks 1.48698 0.0 5.08955    
cufflinks 1.78664 0.0 5.98536    
cufflinks 1.25        
cufflinks 0.78        
cufflinks 2.435        
cufflinks 4.252       High
cufflinks 3.432       High
cufflinks 0.12       Low
cufflinks 0.957        
cufflinks 2.512        
cufflinks 1.822        
cufflinks 1.938        
cufflinks 0.823        
cufflinks 1.411        
cufflinks 0.925        
cufflinks 1.301        
cufflinks 0.722        
cufflinks 0.636        
cufflinks 2.26        

0 Strain