Gene : Glyma.18G182500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31636:SF14 - SCARECROW-LIKE PROTEIN 9 Genomic Order:  1825
Name:  ? Glyma.18G182500 Secondary Identifier:  ? PAC:30557443
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G182500 0.5kb upstream 0.5kb upstream 4422 true Chr18: 43995990-44000411 Glycine max
Glyma.18G182500 0.5kb upstream 0.5kb upstream 500 false Chr18: 43995990-43996489 Glycine max
Glyma.18G182500 0.5kb downstream 0.5kb downstream 4422 true Chr18: 43996490-44000911 Glycine max
Glyma.18G182500 0.5kb downstream 0.5kb downstream 500 false Chr18: 44000412-44000911 Glycine max
Glyma.18G182500 1.0kb upstream 1.0kb upstream 4922 true Chr18: 43995490-44000411 Glycine max
Glyma.18G182500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 43995490-43996489 Glycine max
Glyma.18G182500 1.0kb downstream 1.0kb downstream 4922 true Chr18: 43996490-44001411 Glycine max
Glyma.18G182500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 44000412-44001411 Glycine max
Glyma.18G182500 2.0kb upstream 2.0kb upstream 5922 true Chr18: 43994490-44000411 Glycine max
Glyma.18G182500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 43994490-43996489 Glycine max
Glyma.18G182500 2.0kb downstream 2.0kb downstream 5922 true Chr18: 43996490-44002411 Glycine max
Glyma.18G182500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 44000412-44002411 Glycine max
Glyma.18G182500 5.0kb upstream 5.0kb upstream 8922 true Chr18: 43991490-44000411 Glycine max
Glyma.18G182500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 43991490-43996489 Glycine max
Glyma.18G182500 5.0kb downstream 5.0kb downstream 8922 true Chr18: 43996490-44005411 Glycine max
Glyma.18G182500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 44000412-44005411 Glycine max
Glyma.18G182500 10.0kb upstream 10.0kb upstream 13922 true Chr18: 43986490-44000411 Glycine max
Glyma.18G182500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 43986490-43996489 Glycine max
Glyma.18G182500 10.0kb downstream 10.0kb downstream 13922 true Chr18: 43996490-44010411 Glycine max
Glyma.18G182500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 44000412-44010411 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309527 5265 Fabidae View MSA
124071892 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.72622 0.0 14.0993    
cufflinks 4.04163 0.0 17.2951   High
cufflinks 2.78284 0.0 13.0906    
cufflinks 2.41201 0.0 11.8976   Low
cufflinks 2.98979 0.0 13.6877    
cufflinks 3.01649 0.0 12.2285    
cufflinks 3.92897 0.0 14.9949   High
cufflinks 2.90712 0.0 11.6164    
cufflinks 2.40387 0.0 10.1148   Low
cufflinks 0.476        
cufflinks 0.399       Low
cufflinks 0.645        
cufflinks 0.548        
cufflinks 0.495        
cufflinks 1.588       High
cufflinks 0.679        
cufflinks 0.988        
cufflinks 0.823        
cufflinks 0.971        
cufflinks 0.864        
cufflinks 0.413       Low
cufflinks 0.926        
cufflinks 0.872        
cufflinks 0.436       Low
cufflinks 0.733        
cufflinks 0.549        

0 Strain