Gene : Glyma.18G178100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10527//PTHR10527:SF29 - IMPORTIN BETA Genomic Order:  1781
Name:  ? Glyma.18G178100 Secondary Identifier:  ? PAC:30558721
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G178100 0.5kb upstream 0.5kb upstream 1315 true Chr18: 42527583-42528897 Glycine max
Glyma.18G178100 0.5kb upstream 0.5kb upstream 500 false Chr18: 42527583-42528082 Glycine max
Glyma.18G178100 0.5kb downstream 0.5kb downstream 1315 true Chr18: 42528083-42529397 Glycine max
Glyma.18G178100 0.5kb downstream 0.5kb downstream 500 false Chr18: 42528898-42529397 Glycine max
Glyma.18G178100 1.0kb upstream 1.0kb upstream 1815 true Chr18: 42527083-42528897 Glycine max
Glyma.18G178100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 42527083-42528082 Glycine max
Glyma.18G178100 1.0kb downstream 1.0kb downstream 1815 true Chr18: 42528083-42529897 Glycine max
Glyma.18G178100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 42528898-42529897 Glycine max
Glyma.18G178100 2.0kb upstream 2.0kb upstream 2815 true Chr18: 42526083-42528897 Glycine max
Glyma.18G178100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 42526083-42528082 Glycine max
Glyma.18G178100 2.0kb downstream 2.0kb downstream 2815 true Chr18: 42528083-42530897 Glycine max
Glyma.18G178100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 42528898-42530897 Glycine max
Glyma.18G178100 5.0kb upstream 5.0kb upstream 5815 true Chr18: 42523083-42528897 Glycine max
Glyma.18G178100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 42523083-42528082 Glycine max
Glyma.18G178100 5.0kb downstream 5.0kb downstream 5815 true Chr18: 42528083-42533897 Glycine max
Glyma.18G178100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 42528898-42533897 Glycine max
Glyma.18G178100 10.0kb upstream 10.0kb upstream 10815 true Chr18: 42518083-42528897 Glycine max
Glyma.18G178100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 42518083-42528082 Glycine max
Glyma.18G178100 10.0kb downstream 10.0kb downstream 10815 true Chr18: 42528083-42538897 Glycine max
Glyma.18G178100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 42528898-42538897 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121613436 5273 Angiosperm Singleton cluster - no MSA
122247425 5265 Fabidae Singleton cluster - no MSA
123991193 5270 Rosid Singleton cluster - no MSA
123566163 5271 Pentapetalae Singleton cluster - no MSA
122600923 5272 Eudicot Singleton cluster - no MSA
120885653 5274 Embryophyte Singleton cluster - no MSA
122926433 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00283524 0.0 0.0279792 Low  
cufflinks 0.00565063 0.0 0.0410813 Low  
cufflinks 0.0052399 0.0 0.0382893 Low  
cufflinks 0.0336615 0.0 0.160652 Low High
cufflinks 0.00651725 0.0 0.0442364 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.44673E-4 0.0 0.0134507 Low Low
cufflinks 0.00332896 0.0 0.030178 Low  
cufflinks 0.00458739 0.0 0.0362841 Low  
cufflinks 0.052     Low  
cufflinks 0.164        
cufflinks 0.074     Low  
cufflinks 0.223       High
cufflinks 0.142        
cufflinks 0.158        
cufflinks 0.091     Low  
cufflinks 0.195        
cufflinks 0.092     Low  
cufflinks 0.25       High
cufflinks 0.127        
cufflinks 0.03     Low Low
cufflinks 0.04     Low Low
cufflinks 0.064     Low  
cufflinks 0.233       High
cufflinks 0.036     Low Low
cufflinks 0.153        

0 Strain