Gene : Glyma.18G140800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF4 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 Genomic Order:  1408
Name:  ? Glyma.18G140800 Secondary Identifier:  ? PAC:30557555
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G140800 0.5kb upstream 0.5kb upstream 8600 true Chr18: 21360922-21369521 Glycine max
Glyma.18G140800 0.5kb upstream 0.5kb upstream 500 false Chr18: 21369022-21369521 Glycine max
Glyma.18G140800 0.5kb downstream 0.5kb downstream 8600 true Chr18: 21360422-21369021 Glycine max
Glyma.18G140800 0.5kb downstream 0.5kb downstream 500 false Chr18: 21360422-21360921 Glycine max
Glyma.18G140800 1.0kb upstream 1.0kb upstream 9100 true Chr18: 21360922-21370021 Glycine max
Glyma.18G140800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 21369022-21370021 Glycine max
Glyma.18G140800 1.0kb downstream 1.0kb downstream 9100 true Chr18: 21359922-21369021 Glycine max
Glyma.18G140800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 21359922-21360921 Glycine max
Glyma.18G140800 2.0kb upstream 2.0kb upstream 10100 true Chr18: 21360922-21371021 Glycine max
Glyma.18G140800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 21369022-21371021 Glycine max
Glyma.18G140800 2.0kb downstream 2.0kb downstream 10100 true Chr18: 21358922-21369021 Glycine max
Glyma.18G140800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 21358922-21360921 Glycine max
Glyma.18G140800 5.0kb upstream 5.0kb upstream 13100 true Chr18: 21360922-21374021 Glycine max
Glyma.18G140800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 21369022-21374021 Glycine max
Glyma.18G140800 5.0kb downstream 5.0kb downstream 13100 true Chr18: 21355922-21369021 Glycine max
Glyma.18G140800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 21355922-21360921 Glycine max
Glyma.18G140800 10.0kb upstream 10.0kb upstream 18100 true Chr18: 21360922-21379021 Glycine max
Glyma.18G140800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 21369022-21379021 Glycine max
Glyma.18G140800 10.0kb downstream 10.0kb downstream 18100 true Chr18: 21350922-21369021 Glycine max
Glyma.18G140800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 21350922-21360921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310953 5265 Fabidae View MSA
124060625 5270 Rosid View MSA
123752142 5271 Pentapetalae View MSA
122792748 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0646765 0.0 0.258921 Low  
cufflinks 0.0621742 0.0 0.249185 Low  
cufflinks 0.0457023 0.0 0.185276 Low  
cufflinks 1.20431 0.0 4.13252    
cufflinks 0.139915 0.0 0.544883 Low  
cufflinks 0.180678 0.0 0.695364 Low  
cufflinks 23.2581 0.0 62.5189 High High
cufflinks 0.0422806 0.0 0.172312 Low  
cufflinks 0.0856421 0.0 0.339278 Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.031     Low High
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.002     Low Low
cufflinks 0.006     Low  
cufflinks 0.014     Low High
cufflinks 0.007     Low  
cufflinks 0.002     Low Low
cufflinks 0.009     Low  
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.007     Low  
cufflinks 0.002     Low Low

0 Strain