Gene : Glyma.18G116700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031//PTHR24031:SF296 - RNA HELICASE Genomic Order:  1167
Name:  ? Glyma.18G116700 Secondary Identifier:  ? PAC:30554668
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G116700 0.5kb upstream 0.5kb upstream 8448 true Chr18: 14267645-14276092 Glycine max
Glyma.18G116700 0.5kb upstream 0.5kb upstream 500 false Chr18: 14275593-14276092 Glycine max
Glyma.18G116700 0.5kb downstream 0.5kb downstream 8448 true Chr18: 14267145-14275592 Glycine max
Glyma.18G116700 0.5kb downstream 0.5kb downstream 500 false Chr18: 14267145-14267644 Glycine max
Glyma.18G116700 1.0kb upstream 1.0kb upstream 8948 true Chr18: 14267645-14276592 Glycine max
Glyma.18G116700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 14275593-14276592 Glycine max
Glyma.18G116700 1.0kb downstream 1.0kb downstream 8948 true Chr18: 14266645-14275592 Glycine max
Glyma.18G116700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 14266645-14267644 Glycine max
Glyma.18G116700 2.0kb upstream 2.0kb upstream 9948 true Chr18: 14267645-14277592 Glycine max
Glyma.18G116700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 14275593-14277592 Glycine max
Glyma.18G116700 2.0kb downstream 2.0kb downstream 9948 true Chr18: 14265645-14275592 Glycine max
Glyma.18G116700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 14265645-14267644 Glycine max
Glyma.18G116700 5.0kb upstream 5.0kb upstream 12948 true Chr18: 14267645-14280592 Glycine max
Glyma.18G116700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 14275593-14280592 Glycine max
Glyma.18G116700 5.0kb downstream 5.0kb downstream 12948 true Chr18: 14262645-14275592 Glycine max
Glyma.18G116700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 14262645-14267644 Glycine max
Glyma.18G116700 10.0kb upstream 10.0kb upstream 17948 true Chr18: 14267645-14285592 Glycine max
Glyma.18G116700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 14275593-14285592 Glycine max
Glyma.18G116700 10.0kb downstream 10.0kb downstream 17948 true Chr18: 14257645-14275592 Glycine max
Glyma.18G116700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 14257645-14267644 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296487 5265 Fabidae View MSA
124035664 5270 Rosid View MSA
123751668 5271 Pentapetalae View MSA
122790470 5272 Eudicot View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.39806 0.0 29.989   High
cufflinks 2.44326 0.0 10.2238    
cufflinks 1.43493 0.0 9.49745   Low
cufflinks 3.97332 0.0 18.7294    
cufflinks 6.03436 0.0 25.4171   High
cufflinks 2.23335 0.0 9.94843    
cufflinks 2.94911 0.0 15.7861    
cufflinks 4.12929 0.0 17.1911    
cufflinks 4.36134 0.0 19.8671    
cufflinks 0.177        
cufflinks 0.043     Low Low
cufflinks 0.307        
cufflinks 0.77       High
cufflinks 0.961       High
cufflinks 0.051     Low Low
cufflinks 0.087     Low  
cufflinks 0.158        
cufflinks 0.274        
cufflinks 0.295        
cufflinks 0.065     Low  
cufflinks 0.072        
cufflinks 0.079     Low  
cufflinks 0.14        
cufflinks 0.067        
cufflinks 0.077     Low  
cufflinks 0.189        

0 Strain