Gene : Glyma.18G061200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  612
Name:  ? Glyma.18G061200 Secondary Identifier:  ? PAC:30554876
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G061200 0.5kb upstream 0.5kb upstream 5298 true Chr18: 5549698-5554995 Glycine max
Glyma.18G061200 0.5kb upstream 0.5kb upstream 500 false Chr18: 5554496-5554995 Glycine max
Glyma.18G061200 0.5kb downstream 0.5kb downstream 5298 true Chr18: 5549198-5554495 Glycine max
Glyma.18G061200 0.5kb downstream 0.5kb downstream 500 false Chr18: 5549198-5549697 Glycine max
Glyma.18G061200 1.0kb upstream 1.0kb upstream 5798 true Chr18: 5549698-5555495 Glycine max
Glyma.18G061200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5554496-5555495 Glycine max
Glyma.18G061200 1.0kb downstream 1.0kb downstream 5798 true Chr18: 5548698-5554495 Glycine max
Glyma.18G061200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5548698-5549697 Glycine max
Glyma.18G061200 2.0kb upstream 2.0kb upstream 6798 true Chr18: 5549698-5556495 Glycine max
Glyma.18G061200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5554496-5556495 Glycine max
Glyma.18G061200 2.0kb downstream 2.0kb downstream 6798 true Chr18: 5547698-5554495 Glycine max
Glyma.18G061200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5547698-5549697 Glycine max
Glyma.18G061200 5.0kb upstream 5.0kb upstream 9798 true Chr18: 5549698-5559495 Glycine max
Glyma.18G061200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5554496-5559495 Glycine max
Glyma.18G061200 5.0kb downstream 5.0kb downstream 9798 true Chr18: 5544698-5554495 Glycine max
Glyma.18G061200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5544698-5549697 Glycine max
Glyma.18G061200 10.0kb upstream 10.0kb upstream 14798 true Chr18: 5549698-5564495 Glycine max
Glyma.18G061200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5554496-5564495 Glycine max
Glyma.18G061200 10.0kb downstream 10.0kb downstream 14798 true Chr18: 5539698-5554495 Glycine max
Glyma.18G061200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5539698-5549697 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308287 5265 Fabidae View MSA
124066732 5270 Rosid View MSA
123736595 5271 Pentapetalae View MSA
122792961 5272 Eudicot View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.77546 0.0 15.6901    
cufflinks 9.30911 0.0 34.2767    
cufflinks 2.29976 0.0 8.43632   Low
cufflinks 5.33192 0.0 19.3848    
cufflinks 7.60271 0.0 29.372    
cufflinks 2.00569 0.0 9.95516   Low
cufflinks 12.1662 0.0 42.8466   High
cufflinks 8.42621 0.0 31.5855    
cufflinks 4.30999 0.0 16.732    
cufflinks 2.105        
cufflinks 0.6       Low
cufflinks 1.083        
cufflinks 1.569        
cufflinks 2.412        
cufflinks 0.735       Low
cufflinks 2.053        
cufflinks 0.883        
cufflinks 2.358        
cufflinks 2.094        
cufflinks 2.255        
cufflinks 0.661       Low
cufflinks 2.485        
cufflinks 2.877       High
cufflinks 0.453       Low
cufflinks 1.763        
cufflinks 0.675       Low

0 Strain