Gene : Glyma.17G250400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13930 - RSAFD1-RELATED Genomic Order:  2504
Name:  ? Glyma.17G250400 Secondary Identifier:  ? PAC:30478606
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7283 Glycine max pathologic  
Gmax PWY-7286 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G250400 0.5kb upstream 0.5kb upstream 5898   true Chr17: 40535051-40540948 Glycine max
Glyma.17G250400 0.5kb upstream 0.5kb upstream 500   false Chr17: 40540449-40540948 Glycine max
Glyma.17G250400 0.5kb downstream 0.5kb downstream 5898   true Chr17: 40534551-40540448 Glycine max
Glyma.17G250400 0.5kb downstream 0.5kb downstream 500   false Chr17: 40534551-40535050 Glycine max
Glyma.17G250400 1.0kb upstream 1.0kb upstream 6398   true Chr17: 40535051-40541448 Glycine max
Glyma.17G250400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40540449-40541448 Glycine max
Glyma.17G250400 1.0kb downstream 1.0kb downstream 6398   true Chr17: 40534051-40540448 Glycine max
Glyma.17G250400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40534051-40535050 Glycine max
Glyma.17G250400 2.0kb upstream 2.0kb upstream 7398   true Chr17: 40535051-40542448 Glycine max
Glyma.17G250400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40540449-40542448 Glycine max
Glyma.17G250400 2.0kb downstream 2.0kb downstream 7398   true Chr17: 40533051-40540448 Glycine max
Glyma.17G250400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40533051-40535050 Glycine max
Glyma.17G250400 5.0kb upstream 5.0kb upstream 10398   true Chr17: 40535051-40545448 Glycine max
Glyma.17G250400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40540449-40545448 Glycine max
Glyma.17G250400 5.0kb downstream 5.0kb downstream 10398   true Chr17: 40530051-40540448 Glycine max
Glyma.17G250400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40530051-40535050 Glycine max
Glyma.17G250400 10.0kb upstream 10.0kb upstream 15398   true Chr17: 40535051-40550448 Glycine max
Glyma.17G250400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40540449-40550448 Glycine max
Glyma.17G250400 10.0kb downstream 10.0kb downstream 15398   true Chr17: 40525051-40540448 Glycine max
Glyma.17G250400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40525051-40535050 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311762 5265 Fabidae View MSA
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.9798 0.0 21.4665   High
cufflinks 5.72125 0.0 15.7024    
cufflinks 3.45292 0.0 9.976   Low
cufflinks 5.01414 0.0 13.9072    
cufflinks 6.23815 0.0 16.9836    
cufflinks 3.03862 0.0 8.89528   Low
cufflinks 5.46928 0.0 15.0455    
cufflinks 5.38093 0.0 14.8382    
cufflinks 4.62415 0.0 12.9012    
cufflinks 2.549        
cufflinks 0.763       Low
cufflinks 2.334        
cufflinks 3.528        
cufflinks 4.499       High
cufflinks 1.065       Low
cufflinks 3.262        
cufflinks 1.668        
cufflinks 2.303        
cufflinks 3.723        
cufflinks 3.395        
cufflinks 1.185       Low
cufflinks 3.478        
cufflinks 4.103       High
cufflinks 1.265       Low
cufflinks 3.251        
cufflinks 1.685        

0 Strain