Gene : Glyma.17G256200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE Genomic Order:  2562
Name:  ? Glyma.17G256200 Secondary Identifier:  ? PAC:30481798
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G256200 0.5kb upstream 0.5kb upstream 6207   true Chr17: 41018196-41024402 Glycine max
Glyma.17G256200 0.5kb upstream 0.5kb upstream 500   false Chr17: 41018196-41018695 Glycine max
Glyma.17G256200 0.5kb downstream 0.5kb downstream 6207   true Chr17: 41018696-41024902 Glycine max
Glyma.17G256200 0.5kb downstream 0.5kb downstream 500   false Chr17: 41024403-41024902 Glycine max
Glyma.17G256200 1.0kb upstream 1.0kb upstream 6707   true Chr17: 41017696-41024402 Glycine max
Glyma.17G256200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41017696-41018695 Glycine max
Glyma.17G256200 1.0kb downstream 1.0kb downstream 6707   true Chr17: 41018696-41025402 Glycine max
Glyma.17G256200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41024403-41025402 Glycine max
Glyma.17G256200 2.0kb upstream 2.0kb upstream 7707   true Chr17: 41016696-41024402 Glycine max
Glyma.17G256200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41016696-41018695 Glycine max
Glyma.17G256200 2.0kb downstream 2.0kb downstream 7707   true Chr17: 41018696-41026402 Glycine max
Glyma.17G256200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41024403-41026402 Glycine max
Glyma.17G256200 5.0kb upstream 5.0kb upstream 10707   true Chr17: 41013696-41024402 Glycine max
Glyma.17G256200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41013696-41018695 Glycine max
Glyma.17G256200 5.0kb downstream 5.0kb downstream 10707   true Chr17: 41018696-41029402 Glycine max
Glyma.17G256200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41024403-41029402 Glycine max
Glyma.17G256200 10.0kb upstream 10.0kb upstream 15707   true Chr17: 41008696-41024402 Glycine max
Glyma.17G256200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41008696-41018695 Glycine max
Glyma.17G256200 10.0kb downstream 10.0kb downstream 15707   true Chr17: 41018696-41034402 Glycine max
Glyma.17G256200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41024403-41034402 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304222 5265 Fabidae View MSA
124065617 5270 Rosid View MSA
123749585 5271 Pentapetalae View MSA
122791616 5272 Eudicot View MSA
122047239 5273 Angiosperm View MSA
121347045 5274 Embryophyte View MSA
123427564 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.44799 0.0 28.1115   High
cufflinks 4.60603 0.0 17.6763    
cufflinks 4.8917 0.0 18.2709    
cufflinks 5.70069 0.0 21.6565    
cufflinks 4.84203 0.0 16.5018    
cufflinks 4.3911 0.0 17.0301   Low
cufflinks 6.72874 0.0 27.5863   High
cufflinks 5.05381 0.0 19.1249    
cufflinks 4.83086 0.0 16.4641    
cufflinks 1.168        
cufflinks 1.015       Low
cufflinks 1.758       High
cufflinks 1.195        
cufflinks 1.279        
cufflinks 1.375        
cufflinks 1.634        
cufflinks 0.665       Low
cufflinks 1.736        
cufflinks 1.627        
cufflinks 1.732        
cufflinks 1.129        
cufflinks 1.835       High
cufflinks 1.492        
cufflinks 1.334        
cufflinks 1.54        
cufflinks 1.089        

0 Strain