Gene : Glyma.17G231800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12276:SF7 - CLATHRIN INTERACTOR EPSIN 1 Genomic Order:  2318
Name:  ? Glyma.17G231800 Secondary Identifier:  ? PAC:30480414
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G231800 0.5kb upstream 0.5kb upstream 10304   true Chr17: 38662340-38672643 Glycine max
Glyma.17G231800 0.5kb upstream 0.5kb upstream 500   false Chr17: 38672144-38672643 Glycine max
Glyma.17G231800 0.5kb downstream 0.5kb downstream 10304   true Chr17: 38661840-38672143 Glycine max
Glyma.17G231800 0.5kb downstream 0.5kb downstream 500   false Chr17: 38661840-38662339 Glycine max
Glyma.17G231800 1.0kb upstream 1.0kb upstream 10804   true Chr17: 38662340-38673143 Glycine max
Glyma.17G231800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38672144-38673143 Glycine max
Glyma.17G231800 1.0kb downstream 1.0kb downstream 10804   true Chr17: 38661340-38672143 Glycine max
Glyma.17G231800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38661340-38662339 Glycine max
Glyma.17G231800 2.0kb upstream 2.0kb upstream 11804   true Chr17: 38662340-38674143 Glycine max
Glyma.17G231800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38672144-38674143 Glycine max
Glyma.17G231800 2.0kb downstream 2.0kb downstream 11804   true Chr17: 38660340-38672143 Glycine max
Glyma.17G231800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38660340-38662339 Glycine max
Glyma.17G231800 5.0kb upstream 5.0kb upstream 14804   true Chr17: 38662340-38677143 Glycine max
Glyma.17G231800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38672144-38677143 Glycine max
Glyma.17G231800 5.0kb downstream 5.0kb downstream 14804   true Chr17: 38657340-38672143 Glycine max
Glyma.17G231800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38657340-38662339 Glycine max
Glyma.17G231800 10.0kb upstream 10.0kb upstream 19804   true Chr17: 38662340-38682143 Glycine max
Glyma.17G231800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38672144-38682143 Glycine max
Glyma.17G231800 10.0kb downstream 10.0kb downstream 19804   true Chr17: 38652340-38672143 Glycine max
Glyma.17G231800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38652340-38662339 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303278 5265 Fabidae View MSA
124066182 5270 Rosid View MSA
123744434 5271 Pentapetalae View MSA
122786482 5272 Eudicot View MSA
122049187 5273 Angiosperm View MSA
121349061 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7179 0.0 39.6849   Low
cufflinks 16.4668 0.0 49.1935    
cufflinks 16.2381 0.0 57.8841    
cufflinks 19.6568 0.0 72.1621    
cufflinks 24.018 0.0 90.0297 High  
cufflinks 33.3201 0.0 130.733 High High
cufflinks 16.0731 0.0 58.5969    
cufflinks 24.484 0.0 76.1287 High  
cufflinks 19.6409 0.0 59.4661 High  
cufflinks 3.62       High
cufflinks 2.296        
cufflinks 2.084        
cufflinks 4.1       High
cufflinks 4.152       High
cufflinks 1.608       Low
cufflinks 2.199        
cufflinks 1.777       Low
cufflinks 3.034        
cufflinks 2.469        
cufflinks 2.103        
cufflinks 2.696        
cufflinks 2.051        
cufflinks 1.881        
cufflinks 2.32        
cufflinks 1.995        
cufflinks 2.639        

0 Strain