Gene : Glyma.17G184800 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0327//KOG0328 - Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases // Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily Genomic Order:  1848
Name:  ? Glyma.17G184800 Secondary Identifier:  ? PAC:30478584
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G184800 0.5kb upstream 0.5kb upstream 3204   true Chr17: 23504648-23507851 Glycine max
Glyma.17G184800 0.5kb upstream 0.5kb upstream 500   false Chr17: 23504648-23505147 Glycine max
Glyma.17G184800 0.5kb downstream 0.5kb downstream 3204   true Chr17: 23505148-23508351 Glycine max
Glyma.17G184800 0.5kb downstream 0.5kb downstream 500   false Chr17: 23507852-23508351 Glycine max
Glyma.17G184800 1.0kb upstream 1.0kb upstream 3704   true Chr17: 23504148-23507851 Glycine max
Glyma.17G184800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 23504148-23505147 Glycine max
Glyma.17G184800 1.0kb downstream 1.0kb downstream 3704   true Chr17: 23505148-23508851 Glycine max
Glyma.17G184800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 23507852-23508851 Glycine max
Glyma.17G184800 2.0kb upstream 2.0kb upstream 4704   true Chr17: 23503148-23507851 Glycine max
Glyma.17G184800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 23503148-23505147 Glycine max
Glyma.17G184800 2.0kb downstream 2.0kb downstream 4704   true Chr17: 23505148-23509851 Glycine max
Glyma.17G184800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 23507852-23509851 Glycine max
Glyma.17G184800 5.0kb upstream 5.0kb upstream 7704   true Chr17: 23500148-23507851 Glycine max
Glyma.17G184800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 23500148-23505147 Glycine max
Glyma.17G184800 5.0kb downstream 5.0kb downstream 7704   true Chr17: 23505148-23512851 Glycine max
Glyma.17G184800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 23507852-23512851 Glycine max
Glyma.17G184800 10.0kb upstream 10.0kb upstream 12704   true Chr17: 23495148-23507851 Glycine max
Glyma.17G184800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 23495148-23505147 Glycine max
Glyma.17G184800 10.0kb downstream 10.0kb downstream 12704   true Chr17: 23505148-23517851 Glycine max
Glyma.17G184800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 23507852-23517851 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309900 5265 Fabidae View MSA
124074899 5270 Rosid View MSA
123752818 5271 Pentapetalae View MSA
122797459 5272 Eudicot View MSA
122050578 5273 Angiosperm View MSA
123429061 5275 Viridiplantae View MSA
121349468 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0491522 0.0 0.211926 Low  
cufflinks 0.107809 0.0 0.440123 Low  
cufflinks 0.127494 0.0 0.515706 Low  
cufflinks 0.0814977 0.0 0.337902 Low  
cufflinks 0.0603566 0.0 0.256034 Low  
cufflinks 0.0236218 0.0 0.108685 Low Low
cufflinks 0.143535 0.0 0.578914 Low  
cufflinks 0.166522 0.0 0.666696 Low High
cufflinks 0.0536929 0.0 0.229736 Low  
cufflinks 0.15        
cufflinks 0.195        
cufflinks 0.143        
cufflinks 0.11        
cufflinks 0.211       High
cufflinks 0.1        
cufflinks 0.062     Low Low
cufflinks 0.089       Low
cufflinks 0.148        
cufflinks 0.207       High
cufflinks 0.159        
cufflinks 0.159        
cufflinks 0.124        
cufflinks 0.137        
cufflinks 0.199       High
cufflinks 0.108        
cufflinks 0.204       High

0 Strain