Gene : Glyma.17G202700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Genomic Order:  2027
Name:  ? Glyma.17G202700 Secondary Identifier:  ? PAC:30478513
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G202700 0.5kb upstream 0.5kb upstream 6812   true Chr17: 32339585-32346396 Glycine max
Glyma.17G202700 0.5kb upstream 0.5kb upstream 500   false Chr17: 32345897-32346396 Glycine max
Glyma.17G202700 0.5kb downstream 0.5kb downstream 6812   true Chr17: 32339085-32345896 Glycine max
Glyma.17G202700 0.5kb downstream 0.5kb downstream 500   false Chr17: 32339085-32339584 Glycine max
Glyma.17G202700 1.0kb upstream 1.0kb upstream 7312   true Chr17: 32339585-32346896 Glycine max
Glyma.17G202700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 32345897-32346896 Glycine max
Glyma.17G202700 1.0kb downstream 1.0kb downstream 7312   true Chr17: 32338585-32345896 Glycine max
Glyma.17G202700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 32338585-32339584 Glycine max
Glyma.17G202700 2.0kb upstream 2.0kb upstream 8312   true Chr17: 32339585-32347896 Glycine max
Glyma.17G202700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 32345897-32347896 Glycine max
Glyma.17G202700 2.0kb downstream 2.0kb downstream 8312   true Chr17: 32337585-32345896 Glycine max
Glyma.17G202700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 32337585-32339584 Glycine max
Glyma.17G202700 5.0kb upstream 5.0kb upstream 11312   true Chr17: 32339585-32350896 Glycine max
Glyma.17G202700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 32345897-32350896 Glycine max
Glyma.17G202700 5.0kb downstream 5.0kb downstream 11312   true Chr17: 32334585-32345896 Glycine max
Glyma.17G202700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 32334585-32339584 Glycine max
Glyma.17G202700 10.0kb upstream 10.0kb upstream 16312   true Chr17: 32339585-32355896 Glycine max
Glyma.17G202700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 32345897-32355896 Glycine max
Glyma.17G202700 10.0kb downstream 10.0kb downstream 16312   true Chr17: 32329585-32345896 Glycine max
Glyma.17G202700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 32329585-32339584 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311023 5265 Fabidae View MSA
124071418 5270 Rosid View MSA
123749462 5271 Pentapetalae View MSA
122791717 5272 Eudicot View MSA
122045456 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121347733 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.0383 0.0 273.894 High  
cufflinks 19.5666 0.0 108.782   Low
cufflinks 181.179 0.0 3005.02 High High
cufflinks 49.7968 0.0 379.642 High  
cufflinks 31.2792 0.0 188.064 High  
cufflinks 35.6963 0.0 213.228 High  
cufflinks 33.9198 0.0 182.483 High  
cufflinks 38.2902 0.0 241.639 High  
cufflinks 85.9353 0.0 857.583 High  
cufflinks 0.91       Low
cufflinks 37.511     High High
cufflinks 17.905     High  
cufflinks 1.651       Low
cufflinks 2.322        
cufflinks 32.396     High High
cufflinks 3.45        
cufflinks 1.988        
cufflinks 9.182     High  
cufflinks 1.464       Low
cufflinks 10.585     High  
cufflinks 15.894     High  
cufflinks 4.621        
cufflinks 1.689       Low
cufflinks 24.511     High High
cufflinks 7.187     High  
cufflinks 4.422        

0 Strain