Gene : Glyma.17G137800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12000:SF3 - LEGUMAIN Genomic Order:  1378
Name:  ? Glyma.17G137800 Secondary Identifier:  ? PAC:30481845
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G137800 0.5kb upstream 0.5kb upstream 5172   true Chr17: 11119941-11125112 Glycine max
Glyma.17G137800 0.5kb upstream 0.5kb upstream 500   false Chr17: 11119941-11120440 Glycine max
Glyma.17G137800 0.5kb downstream 0.5kb downstream 5172   true Chr17: 11120441-11125612 Glycine max
Glyma.17G137800 0.5kb downstream 0.5kb downstream 500   false Chr17: 11125113-11125612 Glycine max
Glyma.17G137800 1.0kb upstream 1.0kb upstream 5672   true Chr17: 11119441-11125112 Glycine max
Glyma.17G137800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11119441-11120440 Glycine max
Glyma.17G137800 1.0kb downstream 1.0kb downstream 5672   true Chr17: 11120441-11126112 Glycine max
Glyma.17G137800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11125113-11126112 Glycine max
Glyma.17G137800 2.0kb upstream 2.0kb upstream 6672   true Chr17: 11118441-11125112 Glycine max
Glyma.17G137800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11118441-11120440 Glycine max
Glyma.17G137800 2.0kb downstream 2.0kb downstream 6672   true Chr17: 11120441-11127112 Glycine max
Glyma.17G137800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11125113-11127112 Glycine max
Glyma.17G137800 5.0kb upstream 5.0kb upstream 9672   true Chr17: 11115441-11125112 Glycine max
Glyma.17G137800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11115441-11120440 Glycine max
Glyma.17G137800 5.0kb downstream 5.0kb downstream 9672   true Chr17: 11120441-11130112 Glycine max
Glyma.17G137800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11125113-11130112 Glycine max
Glyma.17G137800 10.0kb upstream 10.0kb upstream 14672   true Chr17: 11110441-11125112 Glycine max
Glyma.17G137800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11110441-11120440 Glycine max
Glyma.17G137800 10.0kb downstream 10.0kb downstream 14672   true Chr17: 11120441-11135112 Glycine max
Glyma.17G137800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11125113-11135112 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301909 5265 Fabidae View MSA
124050213 5270 Rosid View MSA
123750585 5271 Pentapetalae View MSA
122797224 5272 Eudicot View MSA
122048479 5273 Angiosperm View MSA
121350664 5274 Embryophyte View MSA
123428632 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391635 0.0 1.45049   Low
cufflinks 0.445636 0.0 1.64069   Low
cufflinks 18.2996 0.0 48.9482    
cufflinks 14.1973 0.0 37.8796    
cufflinks 15.1705 0.0 40.474    
cufflinks 1.01947 0.0 3.54198    
cufflinks 212.532 0.0 830.575 High High
cufflinks 29.8346 0.0 81.7596 High  
cufflinks 23.6592 0.0 63.8585 High  
cufflinks 0.158        
cufflinks 15.924     High High
cufflinks 4.371        
cufflinks 0.269        
cufflinks 0.35        
cufflinks 69.205     High High
cufflinks 0.126        
cufflinks 2.043        
cufflinks 1.16        
cufflinks 0.229        
cufflinks 0.142        
cufflinks 18.004     High High
cufflinks 0.174        
cufflinks 0.088     Low Low
cufflinks 21.594     High High
cufflinks 0.196        
cufflinks 13.396     High High

0 Strain