Gene : Glyma.17G065500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31713:SF12 - CALMODULIN-BINDING PROTEIN Genomic Order:  655
Name:  ? Glyma.17G065500 Secondary Identifier:  ? PAC:30478720
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G065500 0.5kb upstream 0.5kb upstream 6591   true Chr17: 5047695-5054285 Glycine max
Glyma.17G065500 0.5kb upstream 0.5kb upstream 500   false Chr17: 5053786-5054285 Glycine max
Glyma.17G065500 0.5kb downstream 0.5kb downstream 6591   true Chr17: 5047195-5053785 Glycine max
Glyma.17G065500 0.5kb downstream 0.5kb downstream 500   false Chr17: 5047195-5047694 Glycine max
Glyma.17G065500 1.0kb upstream 1.0kb upstream 7091   true Chr17: 5047695-5054785 Glycine max
Glyma.17G065500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5053786-5054785 Glycine max
Glyma.17G065500 1.0kb downstream 1.0kb downstream 7091   true Chr17: 5046695-5053785 Glycine max
Glyma.17G065500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5046695-5047694 Glycine max
Glyma.17G065500 2.0kb upstream 2.0kb upstream 8091   true Chr17: 5047695-5055785 Glycine max
Glyma.17G065500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5053786-5055785 Glycine max
Glyma.17G065500 2.0kb downstream 2.0kb downstream 8091   true Chr17: 5045695-5053785 Glycine max
Glyma.17G065500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5045695-5047694 Glycine max
Glyma.17G065500 5.0kb upstream 5.0kb upstream 11091   true Chr17: 5047695-5058785 Glycine max
Glyma.17G065500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5053786-5058785 Glycine max
Glyma.17G065500 5.0kb downstream 5.0kb downstream 11091   true Chr17: 5042695-5053785 Glycine max
Glyma.17G065500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5042695-5047694 Glycine max
Glyma.17G065500 10.0kb upstream 10.0kb upstream 16091   true Chr17: 5047695-5063785 Glycine max
Glyma.17G065500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5053786-5063785 Glycine max
Glyma.17G065500 10.0kb downstream 10.0kb downstream 16091   true Chr17: 5037695-5053785 Glycine max
Glyma.17G065500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5037695-5047694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041199 5273 Angiosperm View MSA
122300045 5265 Fabidae View MSA
124060519 5270 Rosid View MSA
123753678 5271 Pentapetalae View MSA
122786667 5272 Eudicot View MSA
121350867 5274 Embryophyte View MSA
123381913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.38 0.0 163.975 High High
cufflinks 26.902 0.0 86.7778 High  
cufflinks 36.1951 0.0 127.42 High High
cufflinks 20.1662 0.0 62.8347 High  
cufflinks 16.9522 0.0 51.0175    
cufflinks 17.5428 0.0 52.9989    
cufflinks 14.8065 0.0 45.5912   Low
cufflinks 25.5878 0.0 84.2742 High  
cufflinks 21.5358 0.0 68.9135 High  
cufflinks 8.276     High  
cufflinks 28.784     High High
cufflinks 7.189        
cufflinks 6.645        
cufflinks 3.425       Low
cufflinks 25.998     High High
cufflinks 11.138     High  
cufflinks 27.347     High High
cufflinks 5.485       Low
cufflinks 9.357     High  
cufflinks 11.299     High  
cufflinks 31.275     High High
cufflinks 12.259     High  
cufflinks 9.961     High  
cufflinks 19.614     High  
cufflinks 11.23     High  
cufflinks 22.535     High  

0 Strain