Gene : Glyma.17G038500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10997:SF29 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  385
Name:  ? Glyma.17G038500 Secondary Identifier:  ? PAC:30481833
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G038500 0.5kb upstream 0.5kb upstream 10515   true Chr17: 2843533-2854047 Glycine max
Glyma.17G038500 0.5kb upstream 0.5kb upstream 500   false Chr17: 2853548-2854047 Glycine max
Glyma.17G038500 0.5kb downstream 0.5kb downstream 10515   true Chr17: 2843033-2853547 Glycine max
Glyma.17G038500 0.5kb downstream 0.5kb downstream 500   false Chr17: 2843033-2843532 Glycine max
Glyma.17G038500 1.0kb upstream 1.0kb upstream 11015   true Chr17: 2843533-2854547 Glycine max
Glyma.17G038500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2853548-2854547 Glycine max
Glyma.17G038500 1.0kb downstream 1.0kb downstream 11015   true Chr17: 2842533-2853547 Glycine max
Glyma.17G038500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2842533-2843532 Glycine max
Glyma.17G038500 2.0kb upstream 2.0kb upstream 12015   true Chr17: 2843533-2855547 Glycine max
Glyma.17G038500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2853548-2855547 Glycine max
Glyma.17G038500 2.0kb downstream 2.0kb downstream 12015   true Chr17: 2841533-2853547 Glycine max
Glyma.17G038500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2841533-2843532 Glycine max
Glyma.17G038500 5.0kb upstream 5.0kb upstream 15015   true Chr17: 2843533-2858547 Glycine max
Glyma.17G038500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2853548-2858547 Glycine max
Glyma.17G038500 5.0kb downstream 5.0kb downstream 15015   true Chr17: 2838533-2853547 Glycine max
Glyma.17G038500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2838533-2843532 Glycine max
Glyma.17G038500 10.0kb upstream 10.0kb upstream 20015   true Chr17: 2843533-2863547 Glycine max
Glyma.17G038500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2853548-2863547 Glycine max
Glyma.17G038500 10.0kb downstream 10.0kb downstream 20015   true Chr17: 2833533-2853547 Glycine max
Glyma.17G038500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2833533-2843532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303606 5265 Fabidae View MSA
124073495 5270 Rosid View MSA
123741351 5271 Pentapetalae View MSA
122788447 5272 Eudicot View MSA
122041720 5273 Angiosperm View MSA
121351265 5274 Embryophyte View MSA
123425484 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.70272 0.0 5.10603   Low
cufflinks 3.95304 0.0 10.8097   High
cufflinks 2.16643 0.0 6.27693    
cufflinks 2.5168 0.0 7.16996    
cufflinks 3.48444 0.0 9.61966    
cufflinks 1.67415 0.0 5.0247   Low
cufflinks 2.96972 0.0 8.32966    
cufflinks 2.73712 0.0 7.72505    
cufflinks 3.16948 0.0 8.81977    
cufflinks 1.423        
cufflinks 1.165        
cufflinks 1.412        
cufflinks 1.676        
cufflinks 1.854       High
cufflinks 0.974        
cufflinks 1.054        
cufflinks 1.136        
cufflinks 1.035        
cufflinks 2.436       High
cufflinks 0.624       Low
cufflinks 1.551        
cufflinks 0.785       Low
cufflinks 1.586        
cufflinks 1.408        
cufflinks 0.897       Low
cufflinks 1.771        

0 Strain