Gene : Glyma.17G044600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31707:SF39 - PECTINESTERASE/PECTINESTERASE INHIBITOR 12-RELATED Genomic Order:  446
Name:  ? Glyma.17G044600 Secondary Identifier:  ? PAC:30480785
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G044600 0.5kb upstream 0.5kb upstream 2898   true Chr17: 3318122-3321019 Glycine max
Glyma.17G044600 0.5kb upstream 0.5kb upstream 500   false Chr17: 3318122-3318621 Glycine max
Glyma.17G044600 0.5kb downstream 0.5kb downstream 2898   true Chr17: 3318622-3321519 Glycine max
Glyma.17G044600 0.5kb downstream 0.5kb downstream 500   false Chr17: 3321020-3321519 Glycine max
Glyma.17G044600 1.0kb upstream 1.0kb upstream 3398   true Chr17: 3317622-3321019 Glycine max
Glyma.17G044600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3317622-3318621 Glycine max
Glyma.17G044600 1.0kb downstream 1.0kb downstream 3398   true Chr17: 3318622-3322019 Glycine max
Glyma.17G044600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3321020-3322019 Glycine max
Glyma.17G044600 2.0kb upstream 2.0kb upstream 4398   true Chr17: 3316622-3321019 Glycine max
Glyma.17G044600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3316622-3318621 Glycine max
Glyma.17G044600 2.0kb downstream 2.0kb downstream 4398   true Chr17: 3318622-3323019 Glycine max
Glyma.17G044600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3321020-3323019 Glycine max
Glyma.17G044600 5.0kb upstream 5.0kb upstream 7398   true Chr17: 3313622-3321019 Glycine max
Glyma.17G044600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3313622-3318621 Glycine max
Glyma.17G044600 5.0kb downstream 5.0kb downstream 7398   true Chr17: 3318622-3326019 Glycine max
Glyma.17G044600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3321020-3326019 Glycine max
Glyma.17G044600 10.0kb upstream 10.0kb upstream 12398   true Chr17: 3308622-3321019 Glycine max
Glyma.17G044600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3308622-3318621 Glycine max
Glyma.17G044600 10.0kb downstream 10.0kb downstream 12398   true Chr17: 3318622-3331019 Glycine max
Glyma.17G044600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3321020-3331019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244188 5265 Fabidae Singleton cluster - no MSA
123988547 5270 Rosid Singleton cluster - no MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0684589 0.0 0.275849 Low  
cufflinks 0.107038 0.0 0.423972 Low  
cufflinks 0.00910846 0.0 0.0427083 Low  
cufflinks 0.0660288 0.0 0.266293 Low  
cufflinks 0.0683872 0.0 0.27558 Low  
cufflinks 7.46197E-4 0.0 0.00688528 Low Low
cufflinks 0.821939 0.0 2.96586   High
cufflinks 0.105719 0.0 0.418557 Low  
cufflinks 5.57449E-4 0.0 0.00582778 Low Low
cufflinks 0.11        
cufflinks 0.016     Low Low
cufflinks 0.065     Low  
cufflinks 0.041     Low  
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.591       High
cufflinks 0.075        
cufflinks 0.023     Low Low
cufflinks 0.069     Low  
cufflinks 0.539       High
cufflinks 0.056     Low  
cufflinks 0.878       High
cufflinks 0.832       High
cufflinks 0.024     Low  
cufflinks 0.357        
cufflinks 0.052     Low  

0 Strain