Gene : Glyma.17G034800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31515:SF0 - TRANSMEMBRANE PROTEIN Genomic Order:  348
Name:  ? Glyma.17G034800 Secondary Identifier:  ? PAC:30480722
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G034800 0.5kb upstream 0.5kb upstream 8281   true Chr17: 2534408-2542688 Glycine max
Glyma.17G034800 0.5kb upstream 0.5kb upstream 500   false Chr17: 2534408-2534907 Glycine max
Glyma.17G034800 0.5kb downstream 0.5kb downstream 8281   true Chr17: 2534908-2543188 Glycine max
Glyma.17G034800 0.5kb downstream 0.5kb downstream 500   false Chr17: 2542689-2543188 Glycine max
Glyma.17G034800 1.0kb upstream 1.0kb upstream 8781   true Chr17: 2533908-2542688 Glycine max
Glyma.17G034800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2533908-2534907 Glycine max
Glyma.17G034800 1.0kb downstream 1.0kb downstream 8781   true Chr17: 2534908-2543688 Glycine max
Glyma.17G034800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2542689-2543688 Glycine max
Glyma.17G034800 2.0kb upstream 2.0kb upstream 9781   true Chr17: 2532908-2542688 Glycine max
Glyma.17G034800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2532908-2534907 Glycine max
Glyma.17G034800 2.0kb downstream 2.0kb downstream 9781   true Chr17: 2534908-2544688 Glycine max
Glyma.17G034800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2542689-2544688 Glycine max
Glyma.17G034800 5.0kb upstream 5.0kb upstream 12781   true Chr17: 2529908-2542688 Glycine max
Glyma.17G034800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2529908-2534907 Glycine max
Glyma.17G034800 5.0kb downstream 5.0kb downstream 12781   true Chr17: 2534908-2547688 Glycine max
Glyma.17G034800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2542689-2547688 Glycine max
Glyma.17G034800 10.0kb upstream 10.0kb upstream 17781   true Chr17: 2524908-2542688 Glycine max
Glyma.17G034800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2524908-2534907 Glycine max
Glyma.17G034800 10.0kb downstream 10.0kb downstream 17781   true Chr17: 2534908-2552688 Glycine max
Glyma.17G034800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2542689-2552688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301438 5265 Fabidae View MSA
124071230 5270 Rosid View MSA
123736708 5271 Pentapetalae View MSA
122793192 5272 Eudicot View MSA
122047868 5273 Angiosperm View MSA
121343983 5274 Embryophyte View MSA
123425193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4399 0.0 30.5643    
cufflinks 7.71833 0.0 20.6444    
cufflinks 4.37025 0.0 12.013   Low
cufflinks 9.1894 0.0 24.5186    
cufflinks 8.51921 0.0 22.749    
cufflinks 7.28843 0.0 19.5231    
cufflinks 12.1748 0.0 32.5547    
cufflinks 6.6022 0.0 17.7427    
cufflinks 15.2173 0.0 41.0422   High
cufflinks 3.037        
cufflinks 1.178       Low
cufflinks 3.624        
cufflinks 3.635        
cufflinks 4.156        
cufflinks 3.323        
cufflinks 3.026        
cufflinks 7.332     High High
cufflinks 4.122        
cufflinks 3.861        
cufflinks 2.734        
cufflinks 2.267        
cufflinks 3.271        
cufflinks 2.763        
cufflinks 1.784       Low
cufflinks 2.591        
cufflinks 12.791     High High

0 Strain