Gene : Glyma.17G033200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR36033:SF1 - NUCLEIC ACID-BINDING PROTEIN-RELATED Genomic Order:  332
Name:  ? Glyma.17G033200 Secondary Identifier:  ? PAC:30479682
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G033200 0.5kb upstream 0.5kb upstream 6741   true Chr17: 2425245-2431985 Glycine max
Glyma.17G033200 0.5kb upstream 0.5kb upstream 500   false Chr17: 2431486-2431985 Glycine max
Glyma.17G033200 0.5kb downstream 0.5kb downstream 6741   true Chr17: 2424745-2431485 Glycine max
Glyma.17G033200 0.5kb downstream 0.5kb downstream 500   false Chr17: 2424745-2425244 Glycine max
Glyma.17G033200 1.0kb upstream 1.0kb upstream 7241   true Chr17: 2425245-2432485 Glycine max
Glyma.17G033200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2431486-2432485 Glycine max
Glyma.17G033200 1.0kb downstream 1.0kb downstream 7241   true Chr17: 2424245-2431485 Glycine max
Glyma.17G033200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2424245-2425244 Glycine max
Glyma.17G033200 2.0kb upstream 2.0kb upstream 8241   true Chr17: 2425245-2433485 Glycine max
Glyma.17G033200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2431486-2433485 Glycine max
Glyma.17G033200 2.0kb downstream 2.0kb downstream 8241   true Chr17: 2423245-2431485 Glycine max
Glyma.17G033200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2423245-2425244 Glycine max
Glyma.17G033200 5.0kb upstream 5.0kb upstream 11241   true Chr17: 2425245-2436485 Glycine max
Glyma.17G033200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2431486-2436485 Glycine max
Glyma.17G033200 5.0kb downstream 5.0kb downstream 11241   true Chr17: 2420245-2431485 Glycine max
Glyma.17G033200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2420245-2425244 Glycine max
Glyma.17G033200 10.0kb upstream 10.0kb upstream 16241   true Chr17: 2425245-2441485 Glycine max
Glyma.17G033200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2431486-2441485 Glycine max
Glyma.17G033200 10.0kb downstream 10.0kb downstream 16241   true Chr17: 2415245-2431485 Glycine max
Glyma.17G033200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2415245-2425244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041122 5273 Angiosperm View MSA
122307379 5265 Fabidae View MSA
124067716 5270 Rosid View MSA
123746954 5271 Pentapetalae View MSA
122791565 5272 Eudicot View MSA
121347408 5274 Embryophyte View MSA
123380541 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0563258 0.0 0.227009 Low Low
cufflinks 1.75652 0.0 10.7891   High
cufflinks 0.248597 0.0 1.77054    
cufflinks 0.289036 0.0 2.31998    
cufflinks 1.41058 0.0 9.3263   High
cufflinks 0.546706 0.0 3.253    
cufflinks 0.345269 0.0 2.17327    
cufflinks 0.617524 0.0 6.71456    
cufflinks 0.909805 0.0 7.85152    
cufflinks 0.041     Low  
cufflinks 0.006     Low Low
cufflinks 0.049     Low  
cufflinks 0.116       High
cufflinks 0.184       High
cufflinks 0.009     Low Low
cufflinks 0.037     Low  
cufflinks 0.016     Low  
cufflinks 0.031     Low  
cufflinks 0.175       High
cufflinks 0.036     Low  
cufflinks 0.012     Low Low
cufflinks 0.046     Low  
cufflinks 0.094     Low High
cufflinks 0.01     Low Low
cufflinks 0.03     Low  
cufflinks 0.023     Low  

0 Strain