Gene : Glyma.16G208400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11689:SF91 - CHLORIDE CHANNEL PROTEIN CLC-C Genomic Order:  2084
Name:  ? Glyma.16G208400 Secondary Identifier:  ? PAC:30559718
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G208400 0.5kb upstream 0.5kb upstream 12578 true Chr16: 36789890-36802467 Glycine max
Glyma.16G208400 0.5kb upstream 0.5kb upstream 500 false Chr16: 36801968-36802467 Glycine max
Glyma.16G208400 0.5kb downstream 0.5kb downstream 12578 true Chr16: 36789390-36801967 Glycine max
Glyma.16G208400 0.5kb downstream 0.5kb downstream 500 false Chr16: 36789390-36789889 Glycine max
Glyma.16G208400 1.0kb upstream 1.0kb upstream 13078 true Chr16: 36789890-36802967 Glycine max
Glyma.16G208400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36801968-36802967 Glycine max
Glyma.16G208400 1.0kb downstream 1.0kb downstream 13078 true Chr16: 36788890-36801967 Glycine max
Glyma.16G208400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36788890-36789889 Glycine max
Glyma.16G208400 2.0kb upstream 2.0kb upstream 14078 true Chr16: 36789890-36803967 Glycine max
Glyma.16G208400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36801968-36803967 Glycine max
Glyma.16G208400 2.0kb downstream 2.0kb downstream 14078 true Chr16: 36787890-36801967 Glycine max
Glyma.16G208400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36787890-36789889 Glycine max
Glyma.16G208400 5.0kb upstream 5.0kb upstream 17078 true Chr16: 36789890-36806967 Glycine max
Glyma.16G208400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36801968-36806967 Glycine max
Glyma.16G208400 5.0kb downstream 5.0kb downstream 17078 true Chr16: 36784890-36801967 Glycine max
Glyma.16G208400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36784890-36789889 Glycine max
Glyma.16G208400 10.0kb upstream 10.0kb upstream 22078 true Chr16: 36789890-36811967 Glycine max
Glyma.16G208400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36801968-36811967 Glycine max
Glyma.16G208400 10.0kb downstream 10.0kb downstream 22078 true Chr16: 36779890-36801967 Glycine max
Glyma.16G208400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36779890-36789889 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311944 5265 Fabidae View MSA
124069720 5270 Rosid View MSA
123745841 5271 Pentapetalae View MSA
122787304 5272 Eudicot View MSA
122047226 5273 Angiosperm View MSA
121350154 5274 Embryophyte View MSA
123428433 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37067 0.0 19.3206    
cufflinks 1.52604 0.0 11.8711    
cufflinks 0.747006 0.0 7.06633    
cufflinks 0.428192 0.0 2.61777   Low
cufflinks 3.07683 0.0 17.9334    
cufflinks 9.38723 0.0 47.8381   High
cufflinks 0.630858 0.0 5.39999   Low
cufflinks 12.5959 0.0 68.4069   High
cufflinks 3.41479 0.0 21.677    
cufflinks 0.085     Low High
cufflinks 0.015     Low  
cufflinks 0.017     Low  
cufflinks 0.049     Low High
cufflinks 0.021     Low  
cufflinks 0.004     Low Low
cufflinks 0.016     Low  
cufflinks 0.043     Low High
cufflinks 0.025     Low  
cufflinks 0.016     Low  
cufflinks 0.02     Low  
cufflinks 0.009     Low Low
cufflinks 0.019     Low  
cufflinks 0.022     Low  
cufflinks 0.017     Low  
cufflinks 0.015     Low  
cufflinks 0.039     Low  

0 Strain