Gene : Glyma.16G197900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22844//PTHR22844:SF176 - F-BOX AND WD40 DOMAIN PROTEIN Genomic Order:  1979
Name:  ? Glyma.16G197900 Secondary Identifier:  ? PAC:30561002
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G197900 0.5kb upstream 0.5kb upstream 5415 true Chr16: 35903620-35909034 Glycine max
Glyma.16G197900 0.5kb upstream 0.5kb upstream 500 false Chr16: 35903620-35904119 Glycine max
Glyma.16G197900 0.5kb downstream 0.5kb downstream 5415 true Chr16: 35904120-35909534 Glycine max
Glyma.16G197900 0.5kb downstream 0.5kb downstream 500 false Chr16: 35909035-35909534 Glycine max
Glyma.16G197900 1.0kb upstream 1.0kb upstream 5915 true Chr16: 35903120-35909034 Glycine max
Glyma.16G197900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35903120-35904119 Glycine max
Glyma.16G197900 1.0kb downstream 1.0kb downstream 5915 true Chr16: 35904120-35910034 Glycine max
Glyma.16G197900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35909035-35910034 Glycine max
Glyma.16G197900 2.0kb upstream 2.0kb upstream 6915 true Chr16: 35902120-35909034 Glycine max
Glyma.16G197900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35902120-35904119 Glycine max
Glyma.16G197900 2.0kb downstream 2.0kb downstream 6915 true Chr16: 35904120-35911034 Glycine max
Glyma.16G197900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35909035-35911034 Glycine max
Glyma.16G197900 5.0kb upstream 5.0kb upstream 9915 true Chr16: 35899120-35909034 Glycine max
Glyma.16G197900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35899120-35904119 Glycine max
Glyma.16G197900 5.0kb downstream 5.0kb downstream 9915 true Chr16: 35904120-35914034 Glycine max
Glyma.16G197900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35909035-35914034 Glycine max
Glyma.16G197900 10.0kb upstream 10.0kb upstream 14915 true Chr16: 35894120-35909034 Glycine max
Glyma.16G197900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35894120-35904119 Glycine max
Glyma.16G197900 10.0kb downstream 10.0kb downstream 14915 true Chr16: 35904120-35919034 Glycine max
Glyma.16G197900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35909035-35919034 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253541 5265 Fabidae View MSA
124071042 5270 Rosid View MSA
123747505 5271 Pentapetalae View MSA
122788072 5272 Eudicot View MSA
122045481 5273 Angiosperm View MSA
121350056 5274 Embryophyte View MSA
123428153 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.22328 0.0 34.6813    
cufflinks 8.49945 0.0 44.3208    
cufflinks 27.2101 0.0 126.218 High High
cufflinks 7.95328 0.0 34.7229    
cufflinks 7.28439 0.0 32.6417    
cufflinks 6.72242 0.0 35.0331    
cufflinks 7.25351 0.0 32.5518    
cufflinks 13.9118 0.0 56.5259    
cufflinks 11.7365 0.0 48.548    
cufflinks 1.1        
cufflinks 1.133        
cufflinks 1.412       High
cufflinks 0.389       Low
cufflinks 0.243       Low
cufflinks 1.48       High
cufflinks 0.694        
cufflinks 0.426       Low
cufflinks 0.77        
cufflinks 0.752        
cufflinks 0.823        
cufflinks 1.027        
cufflinks 0.789        
cufflinks 0.755        
cufflinks 0.865        
cufflinks 0.793        
cufflinks 0.749        

0 Strain