Gene : Glyma.16G147800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13052//PTHR13052:SF2 - NFRKB-RELATED Genomic Order:  1478
Name:  ? Glyma.16G147800 Secondary Identifier:  ? PAC:30560233
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G147800 0.5kb upstream 0.5kb upstream 10182 true Chr16: 30852940-30863121 Glycine max
Glyma.16G147800 0.5kb upstream 0.5kb upstream 500 false Chr16: 30852940-30853439 Glycine max
Glyma.16G147800 0.5kb downstream 0.5kb downstream 10182 true Chr16: 30853440-30863621 Glycine max
Glyma.16G147800 0.5kb downstream 0.5kb downstream 500 false Chr16: 30863122-30863621 Glycine max
Glyma.16G147800 1.0kb upstream 1.0kb upstream 10682 true Chr16: 30852440-30863121 Glycine max
Glyma.16G147800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 30852440-30853439 Glycine max
Glyma.16G147800 1.0kb downstream 1.0kb downstream 10682 true Chr16: 30853440-30864121 Glycine max
Glyma.16G147800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 30863122-30864121 Glycine max
Glyma.16G147800 2.0kb upstream 2.0kb upstream 11682 true Chr16: 30851440-30863121 Glycine max
Glyma.16G147800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 30851440-30853439 Glycine max
Glyma.16G147800 2.0kb downstream 2.0kb downstream 11682 true Chr16: 30853440-30865121 Glycine max
Glyma.16G147800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 30863122-30865121 Glycine max
Glyma.16G147800 5.0kb upstream 5.0kb upstream 14682 true Chr16: 30848440-30863121 Glycine max
Glyma.16G147800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 30848440-30853439 Glycine max
Glyma.16G147800 5.0kb downstream 5.0kb downstream 14682 true Chr16: 30853440-30868121 Glycine max
Glyma.16G147800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 30863122-30868121 Glycine max
Glyma.16G147800 10.0kb upstream 10.0kb upstream 19682 true Chr16: 30843440-30863121 Glycine max
Glyma.16G147800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 30843440-30853439 Glycine max
Glyma.16G147800 10.0kb downstream 10.0kb downstream 19682 true Chr16: 30853440-30873121 Glycine max
Glyma.16G147800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 30863122-30873121 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314874 5265 Fabidae View MSA
124071265 5270 Rosid View MSA
123736774 5271 Pentapetalae View MSA
122769878 5272 Eudicot View MSA
122049925 5273 Angiosperm View MSA
121349740 5274 Embryophyte View MSA
123381421 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7279 0.0 65.5738   High
cufflinks 6.7128 0.0 25.376    
cufflinks 11.6655 0.0 40.8261   High
cufflinks 5.93661 0.0 18.1698    
cufflinks 3.78395 0.0 12.2879   Low
cufflinks 3.01123 0.0 9.81962   Low
cufflinks 8.41249 0.0 31.8351    
cufflinks 6.92337 0.0 20.4896    
cufflinks 5.40237 0.0 16.2833    
cufflinks 1.109        
cufflinks 2.54        
cufflinks 1.762        
cufflinks 0.668       Low
cufflinks 0.621       Low
cufflinks 1.362        
cufflinks 2.512        
cufflinks 0.943       Low
cufflinks 1.443        
cufflinks 1.512        
cufflinks 3.008        
cufflinks 2.851        
cufflinks 3.012        
cufflinks 2.511        
cufflinks 3.362       High
cufflinks 2.74        
cufflinks 1.988        

0 Strain