Gene : Glyma.16G160700 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1607
Name:  ? Glyma.16G160700 Secondary Identifier:  ? PAC:30559934
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G160700 0.5kb upstream 0.5kb upstream 3979 true Chr16: 31986044-31990022 Glycine max
Glyma.16G160700 0.5kb upstream 0.5kb upstream 500 false Chr16: 31986044-31986543 Glycine max
Glyma.16G160700 0.5kb downstream 0.5kb downstream 3979 true Chr16: 31986544-31990522 Glycine max
Glyma.16G160700 0.5kb downstream 0.5kb downstream 500 false Chr16: 31990023-31990522 Glycine max
Glyma.16G160700 1.0kb upstream 1.0kb upstream 4479 true Chr16: 31985544-31990022 Glycine max
Glyma.16G160700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31985544-31986543 Glycine max
Glyma.16G160700 1.0kb downstream 1.0kb downstream 4479 true Chr16: 31986544-31991022 Glycine max
Glyma.16G160700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31990023-31991022 Glycine max
Glyma.16G160700 2.0kb upstream 2.0kb upstream 5479 true Chr16: 31984544-31990022 Glycine max
Glyma.16G160700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31984544-31986543 Glycine max
Glyma.16G160700 2.0kb downstream 2.0kb downstream 5479 true Chr16: 31986544-31992022 Glycine max
Glyma.16G160700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31990023-31992022 Glycine max
Glyma.16G160700 5.0kb upstream 5.0kb upstream 8479 true Chr16: 31981544-31990022 Glycine max
Glyma.16G160700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31981544-31986543 Glycine max
Glyma.16G160700 5.0kb downstream 5.0kb downstream 8479 true Chr16: 31986544-31995022 Glycine max
Glyma.16G160700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31990023-31995022 Glycine max
Glyma.16G160700 10.0kb upstream 10.0kb upstream 13479 true Chr16: 31976544-31990022 Glycine max
Glyma.16G160700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31976544-31986543 Glycine max
Glyma.16G160700 10.0kb downstream 10.0kb downstream 13479 true Chr16: 31986544-32000022 Glycine max
Glyma.16G160700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31990023-32000022 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313793 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00847086 0.0 0.0400777 Low  
cufflinks 0.0153896 0.0 0.0689943 Low  
cufflinks 1.10691E-4 0.0 0.00257116 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0977537 0.0 0.389217 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.129       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.145       High
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain