Gene : Glyma.16G171200 G. max Wm82.a2.v1
Defline:  (1 of 7) 2.7.11.1//3.2.1.15 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Polygalacturonase / Pectinase Genomic Order:  1712
Name:  ? Glyma.16G171200 Secondary Identifier:  ? PAC:30560288
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G171200 0.5kb upstream 0.5kb upstream 4865 true Chr16: 33161054-33165918 Glycine max
Glyma.16G171200 0.5kb upstream 0.5kb upstream 500 false Chr16: 33161054-33161553 Glycine max
Glyma.16G171200 0.5kb downstream 0.5kb downstream 4865 true Chr16: 33161554-33166418 Glycine max
Glyma.16G171200 0.5kb downstream 0.5kb downstream 500 false Chr16: 33165919-33166418 Glycine max
Glyma.16G171200 1.0kb upstream 1.0kb upstream 5365 true Chr16: 33160554-33165918 Glycine max
Glyma.16G171200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 33160554-33161553 Glycine max
Glyma.16G171200 1.0kb downstream 1.0kb downstream 5365 true Chr16: 33161554-33166918 Glycine max
Glyma.16G171200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 33165919-33166918 Glycine max
Glyma.16G171200 2.0kb upstream 2.0kb upstream 6365 true Chr16: 33159554-33165918 Glycine max
Glyma.16G171200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 33159554-33161553 Glycine max
Glyma.16G171200 2.0kb downstream 2.0kb downstream 6365 true Chr16: 33161554-33167918 Glycine max
Glyma.16G171200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 33165919-33167918 Glycine max
Glyma.16G171200 5.0kb upstream 5.0kb upstream 9365 true Chr16: 33156554-33165918 Glycine max
Glyma.16G171200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 33156554-33161553 Glycine max
Glyma.16G171200 5.0kb downstream 5.0kb downstream 9365 true Chr16: 33161554-33170918 Glycine max
Glyma.16G171200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 33165919-33170918 Glycine max
Glyma.16G171200 10.0kb upstream 10.0kb upstream 14365 true Chr16: 33151554-33165918 Glycine max
Glyma.16G171200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 33151554-33161553 Glycine max
Glyma.16G171200 10.0kb downstream 10.0kb downstream 14365 true Chr16: 33161554-33175918 Glycine max
Glyma.16G171200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 33165919-33175918 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315107 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.73217 0.0 5.32547   High
cufflinks 0.00726514 0.0 0.0324852 Low Low
cufflinks 0.0565184 0.0 0.222851 Low  
cufflinks 0.0190069 0.0 0.0787293 Low  
cufflinks 0.0420465 0.0 0.16803 Low  
cufflinks 0.0542156 0.0 0.214426 Low  
cufflinks 0.0140818 0.0 0.059827 Low  
cufflinks 0.0224051 0.0 0.0918921 Low  
cufflinks 0.0715428 0.0 0.280063 Low  
cufflinks 0.011     Low  
cufflinks 0.005     Low Low
cufflinks 0.029     Low  
cufflinks 0.086     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.004     Low Low
cufflinks 0.026     Low  
cufflinks 0.024     Low  
cufflinks 0.003     Low Low
cufflinks 0.012     Low  
cufflinks 0.018     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  

0 Strain