Gene : Glyma.16G163100 G. max Wm82.a2.v1
Defline:  (1 of 788) PF13041 - PPR repeat family (PPR_2) Genomic Order:  1631
Name:  ? Glyma.16G163100 Secondary Identifier:  ? PAC:30561138
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G163100 0.5kb upstream 0.5kb upstream 3486 true Chr16: 32180450-32183935 Glycine max
Glyma.16G163100 0.5kb upstream 0.5kb upstream 500 false Chr16: 32183436-32183935 Glycine max
Glyma.16G163100 0.5kb downstream 0.5kb downstream 3486 true Chr16: 32179950-32183435 Glycine max
Glyma.16G163100 0.5kb downstream 0.5kb downstream 500 false Chr16: 32179950-32180449 Glycine max
Glyma.16G163100 1.0kb upstream 1.0kb upstream 3986 true Chr16: 32180450-32184435 Glycine max
Glyma.16G163100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 32183436-32184435 Glycine max
Glyma.16G163100 1.0kb downstream 1.0kb downstream 3986 true Chr16: 32179450-32183435 Glycine max
Glyma.16G163100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 32179450-32180449 Glycine max
Glyma.16G163100 2.0kb upstream 2.0kb upstream 4986 true Chr16: 32180450-32185435 Glycine max
Glyma.16G163100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 32183436-32185435 Glycine max
Glyma.16G163100 2.0kb downstream 2.0kb downstream 4986 true Chr16: 32178450-32183435 Glycine max
Glyma.16G163100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 32178450-32180449 Glycine max
Glyma.16G163100 5.0kb upstream 5.0kb upstream 7986 true Chr16: 32180450-32188435 Glycine max
Glyma.16G163100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 32183436-32188435 Glycine max
Glyma.16G163100 5.0kb downstream 5.0kb downstream 7986 true Chr16: 32175450-32183435 Glycine max
Glyma.16G163100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 32175450-32180449 Glycine max
Glyma.16G163100 10.0kb upstream 10.0kb upstream 12986 true Chr16: 32180450-32193435 Glycine max
Glyma.16G163100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 32183436-32193435 Glycine max
Glyma.16G163100 10.0kb downstream 10.0kb downstream 12986 true Chr16: 32170450-32183435 Glycine max
Glyma.16G163100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 32170450-32180449 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313793 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01848 0.0 3.52129    
cufflinks 1.65287 0.0 5.37471    
cufflinks 0.889294 0.0 3.09276   Low
cufflinks 1.78262 0.0 5.73458    
cufflinks 1.4444 0.0 4.81051    
cufflinks 4.0102 0.0 11.555   High
cufflinks 1.62159 0.0 5.32219    
cufflinks 1.3637 0.0 4.55264    
cufflinks 1.46591 0.0 4.84801    
cufflinks 1.021        
cufflinks 0.413       Low
cufflinks 1.378        
cufflinks 2.262        
cufflinks 2.072        
cufflinks 0.405       Low
cufflinks 1.712        
cufflinks 0.348       Low
cufflinks 2.233        
cufflinks 1.42        
cufflinks 2.848       High
cufflinks 0.425       Low
cufflinks 2.249        
cufflinks 2.135        
cufflinks 0.6        
cufflinks 2.192        
cufflinks 0.308       Low

0 Strain