Gene : Glyma.16G119900 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11079//PTHR11079:SF90 - CYTOSINE DEAMINASE Genomic Order:  1199
Name:  ? Glyma.16G119900 Secondary Identifier:  ? PAC:30559192
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G119900 0.5kb upstream 0.5kb upstream 4182 true Chr16: 26773281-26777462 Glycine max
Glyma.16G119900 0.5kb upstream 0.5kb upstream 500 false Chr16: 26773281-26773780 Glycine max
Glyma.16G119900 0.5kb downstream 0.5kb downstream 4182 true Chr16: 26773781-26777962 Glycine max
Glyma.16G119900 0.5kb downstream 0.5kb downstream 500 false Chr16: 26777463-26777962 Glycine max
Glyma.16G119900 1.0kb upstream 1.0kb upstream 4682 true Chr16: 26772781-26777462 Glycine max
Glyma.16G119900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 26772781-26773780 Glycine max
Glyma.16G119900 1.0kb downstream 1.0kb downstream 4682 true Chr16: 26773781-26778462 Glycine max
Glyma.16G119900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 26777463-26778462 Glycine max
Glyma.16G119900 2.0kb upstream 2.0kb upstream 5682 true Chr16: 26771781-26777462 Glycine max
Glyma.16G119900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 26771781-26773780 Glycine max
Glyma.16G119900 2.0kb downstream 2.0kb downstream 5682 true Chr16: 26773781-26779462 Glycine max
Glyma.16G119900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 26777463-26779462 Glycine max
Glyma.16G119900 5.0kb upstream 5.0kb upstream 8682 true Chr16: 26768781-26777462 Glycine max
Glyma.16G119900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 26768781-26773780 Glycine max
Glyma.16G119900 5.0kb downstream 5.0kb downstream 8682 true Chr16: 26773781-26782462 Glycine max
Glyma.16G119900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 26777463-26782462 Glycine max
Glyma.16G119900 10.0kb upstream 10.0kb upstream 13682 true Chr16: 26763781-26777462 Glycine max
Glyma.16G119900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 26763781-26773780 Glycine max
Glyma.16G119900 10.0kb downstream 10.0kb downstream 13682 true Chr16: 26773781-26787462 Glycine max
Glyma.16G119900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 26777463-26787462 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121613387 5273 Angiosperm Singleton cluster - no MSA
122247357 5265 Fabidae Singleton cluster - no MSA
123991137 5270 Rosid Singleton cluster - no MSA
123566111 5271 Pentapetalae Singleton cluster - no MSA
122600871 5272 Eudicot Singleton cluster - no MSA
120885604 5274 Embryophyte Singleton cluster - no MSA
122926387 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.190733 0.0 0.745284 Low  
cufflinks 0.168396 0.0 1.28528 Low  
cufflinks 0.348997 0.0 2.33148    
cufflinks 0.213895 0.0 1.52964    
cufflinks 0.202438 0.0 1.51452 Low  
cufflinks 0.0928626 0.0 0.374938 Low Low
cufflinks 0.321404 0.0 1.58759    
cufflinks 0.445497 0.0 2.89744   High
cufflinks 0.261332 0.0 1.26234    
cufflinks 0.046     Low  
cufflinks 0.051     Low  
cufflinks 0.023     Low  
cufflinks 0.002     Low Low
cufflinks 0.015     Low  
cufflinks 0.059        
cufflinks 0.034     Low  
cufflinks 0.361       High
cufflinks 0.085     Low  
cufflinks 0.01     Low  
cufflinks 0.02     Low  
cufflinks 0.039     Low  
cufflinks 0.023     Low  
cufflinks 0.003     Low Low
cufflinks 0.08        
cufflinks 0.042     Low  
cufflinks 0.539       High

0 Strain