Gene : Glyma.16G132200 G. max Wm82.a2.v1
Genomic Order:  1322 Name:  ? Glyma.16G132200
Secondary Identifier:  ? PAC:30562282
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G132200 0.5kb upstream 0.5kb upstream 900 true Chr16: 28858360-28859259 Glycine max
Glyma.16G132200 0.5kb upstream 0.5kb upstream 500 false Chr16: 28858760-28859259 Glycine max
Glyma.16G132200 0.5kb downstream 0.5kb downstream 900 true Chr16: 28857860-28858759 Glycine max
Glyma.16G132200 0.5kb downstream 0.5kb downstream 500 false Chr16: 28857860-28858359 Glycine max
Glyma.16G132200 1.0kb upstream 1.0kb upstream 1400 true Chr16: 28858360-28859759 Glycine max
Glyma.16G132200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28858760-28859759 Glycine max
Glyma.16G132200 1.0kb downstream 1.0kb downstream 1400 true Chr16: 28857360-28858759 Glycine max
Glyma.16G132200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28857360-28858359 Glycine max
Glyma.16G132200 2.0kb upstream 2.0kb upstream 2400 true Chr16: 28858360-28860759 Glycine max
Glyma.16G132200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28858760-28860759 Glycine max
Glyma.16G132200 2.0kb downstream 2.0kb downstream 2400 true Chr16: 28856360-28858759 Glycine max
Glyma.16G132200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28856360-28858359 Glycine max
Glyma.16G132200 5.0kb upstream 5.0kb upstream 5400 true Chr16: 28858360-28863759 Glycine max
Glyma.16G132200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28858760-28863759 Glycine max
Glyma.16G132200 5.0kb downstream 5.0kb downstream 5400 true Chr16: 28853360-28858759 Glycine max
Glyma.16G132200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28853360-28858359 Glycine max
Glyma.16G132200 10.0kb upstream 10.0kb upstream 10400 true Chr16: 28858360-28868759 Glycine max
Glyma.16G132200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28858760-28868759 Glycine max
Glyma.16G132200 10.0kb downstream 10.0kb downstream 10400 true Chr16: 28848360-28858759 Glycine max
Glyma.16G132200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28848360-28858359 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615266 5273 Angiosperm Singleton cluster - no MSA
122250033 5265 Fabidae Singleton cluster - no MSA
123993364 5270 Rosid Singleton cluster - no MSA
123568152 5271 Pentapetalae Singleton cluster - no MSA
122602899 5272 Eudicot Singleton cluster - no MSA
120887462 5274 Embryophyte Singleton cluster - no MSA
122928218 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0896822 0.0 0.424308 Low  
cufflinks 0.0816848 0.0 0.392743 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.307632 0.0 1.31108   High
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.4       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain