Gene : Glyma.16G132600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24089:SF62 - MITOCHONDRIAL FOLATE TRANSPORTER/CARRIER Genomic Order:  1326
Name:  ? Glyma.16G132600 Secondary Identifier:  ? PAC:30558998
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G132600 0.5kb upstream 0.5kb upstream 6660 true Chr16: 28905716-28912375 Glycine max
Glyma.16G132600 0.5kb upstream 0.5kb upstream 500 false Chr16: 28911876-28912375 Glycine max
Glyma.16G132600 0.5kb downstream 0.5kb downstream 6660 true Chr16: 28905216-28911875 Glycine max
Glyma.16G132600 0.5kb downstream 0.5kb downstream 500 false Chr16: 28905216-28905715 Glycine max
Glyma.16G132600 1.0kb upstream 1.0kb upstream 7160 true Chr16: 28905716-28912875 Glycine max
Glyma.16G132600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28911876-28912875 Glycine max
Glyma.16G132600 1.0kb downstream 1.0kb downstream 7160 true Chr16: 28904716-28911875 Glycine max
Glyma.16G132600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28904716-28905715 Glycine max
Glyma.16G132600 2.0kb upstream 2.0kb upstream 8160 true Chr16: 28905716-28913875 Glycine max
Glyma.16G132600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28911876-28913875 Glycine max
Glyma.16G132600 2.0kb downstream 2.0kb downstream 8160 true Chr16: 28903716-28911875 Glycine max
Glyma.16G132600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28903716-28905715 Glycine max
Glyma.16G132600 5.0kb upstream 5.0kb upstream 11160 true Chr16: 28905716-28916875 Glycine max
Glyma.16G132600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28911876-28916875 Glycine max
Glyma.16G132600 5.0kb downstream 5.0kb downstream 11160 true Chr16: 28900716-28911875 Glycine max
Glyma.16G132600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28900716-28905715 Glycine max
Glyma.16G132600 10.0kb upstream 10.0kb upstream 16160 true Chr16: 28905716-28921875 Glycine max
Glyma.16G132600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28911876-28921875 Glycine max
Glyma.16G132600 10.0kb downstream 10.0kb downstream 16160 true Chr16: 28895716-28911875 Glycine max
Glyma.16G132600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28895716-28905715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302821 5265 Fabidae View MSA
124069102 5270 Rosid View MSA
123741460 5271 Pentapetalae View MSA
122787362 5272 Eudicot View MSA
122046030 5273 Angiosperm View MSA
121346896 5274 Embryophyte View MSA
123426898 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.84024 0.0 17.6349   Low
cufflinks 2.5266 0.0 22.0109    
cufflinks 1.75607 0.0 15.4314   Low
cufflinks 2.60776 0.0 29.1336    
cufflinks 2.83512 0.0 27.0611    
cufflinks 2.22265 0.0 16.3074    
cufflinks 3.32018 0.0 25.7637   High
cufflinks 1.99436 0.0 23.5732    
cufflinks 2.19421 0.0 19.9455    
cufflinks 0.029     Low  
cufflinks 0.017     Low Low
cufflinks 0.042     Low  
cufflinks 0.053     Low  
cufflinks 0.068     Low High
cufflinks 0.01     Low Low
cufflinks 0.046     Low  
cufflinks 0.013     Low Low
cufflinks 0.059     Low  
cufflinks 0.058     Low  
cufflinks 0.047     Low  
cufflinks 0.019     Low  
cufflinks 0.051     Low  
cufflinks 0.052     Low  
cufflinks 0.02     Low  
cufflinks 0.049     Low  
cufflinks 0.022     Low  

0 Strain