Gene : Glyma.16G093800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799//PTHR10799:SF698 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  938
Name:  ? Glyma.16G093800 Secondary Identifier:  ? PAC:30560819
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G093800 0.5kb upstream 0.5kb upstream 16708 true Chr16: 15144247-15160954 Glycine max
Glyma.16G093800 0.5kb upstream 0.5kb upstream 500 false Chr16: 15160455-15160954 Glycine max
Glyma.16G093800 0.5kb downstream 0.5kb downstream 16708 true Chr16: 15143747-15160454 Glycine max
Glyma.16G093800 0.5kb downstream 0.5kb downstream 500 false Chr16: 15143747-15144246 Glycine max
Glyma.16G093800 1.0kb upstream 1.0kb upstream 17208 true Chr16: 15144247-15161454 Glycine max
Glyma.16G093800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 15160455-15161454 Glycine max
Glyma.16G093800 1.0kb downstream 1.0kb downstream 17208 true Chr16: 15143247-15160454 Glycine max
Glyma.16G093800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 15143247-15144246 Glycine max
Glyma.16G093800 2.0kb upstream 2.0kb upstream 18208 true Chr16: 15144247-15162454 Glycine max
Glyma.16G093800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 15160455-15162454 Glycine max
Glyma.16G093800 2.0kb downstream 2.0kb downstream 18208 true Chr16: 15142247-15160454 Glycine max
Glyma.16G093800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 15142247-15144246 Glycine max
Glyma.16G093800 5.0kb upstream 5.0kb upstream 21208 true Chr16: 15144247-15165454 Glycine max
Glyma.16G093800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 15160455-15165454 Glycine max
Glyma.16G093800 5.0kb downstream 5.0kb downstream 21208 true Chr16: 15139247-15160454 Glycine max
Glyma.16G093800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 15139247-15144246 Glycine max
Glyma.16G093800 10.0kb upstream 10.0kb upstream 26208 true Chr16: 15144247-15170454 Glycine max
Glyma.16G093800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 15160455-15170454 Glycine max
Glyma.16G093800 10.0kb downstream 10.0kb downstream 26208 true Chr16: 15134247-15160454 Glycine max
Glyma.16G093800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 15134247-15144246 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026618 5273 Angiosperm View MSA
122254806 5265 Fabidae View MSA
123996810 5270 Rosid View MSA
123747187 5271 Pentapetalae View MSA
122790162 5272 Eudicot View MSA
121351372 5274 Embryophyte View MSA
123428399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.39401 0.0 37.7079    
cufflinks 4.70609 0.0 33.2261    
cufflinks 7.44988 0.0 54.8661   High
cufflinks 4.77473 0.0 30.1784    
cufflinks 3.41801 0.0 28.5919    
cufflinks 2.48789 0.0 16.2184   Low
cufflinks 5.63619 0.0 30.5594    
cufflinks 3.24602 0.0 19.3657    
cufflinks 3.88714 0.0 17.5502    
cufflinks 0.042     Low Low
cufflinks 0.058        
cufflinks 0.078     Low  
cufflinks 0.046     Low  
cufflinks 0.039     Low Low
cufflinks 0.044     Low Low
cufflinks 0.098     Low High
cufflinks 0.039     Low Low
cufflinks 0.088     Low  
cufflinks 0.093     Low High
cufflinks 0.098       High
cufflinks 0.043     Low Low
cufflinks 0.104       High
cufflinks 0.081     Low  
cufflinks 0.063        
cufflinks 0.093     Low High
cufflinks 0.055     Low  

0 Strain