Gene : Glyma.16G105100 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG4629 - Predicted mechanosensitive ion channel Genomic Order:  1051
Name:  ? Glyma.16G105100 Secondary Identifier:  ? PAC:30559148
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G105100 0.5kb upstream 0.5kb upstream 8466 true Chr16: 21259552-21268017 Glycine max
Glyma.16G105100 0.5kb upstream 0.5kb upstream 500 false Chr16: 21267518-21268017 Glycine max
Glyma.16G105100 0.5kb downstream 0.5kb downstream 8466 true Chr16: 21259052-21267517 Glycine max
Glyma.16G105100 0.5kb downstream 0.5kb downstream 500 false Chr16: 21259052-21259551 Glycine max
Glyma.16G105100 1.0kb upstream 1.0kb upstream 8966 true Chr16: 21259552-21268517 Glycine max
Glyma.16G105100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 21267518-21268517 Glycine max
Glyma.16G105100 1.0kb downstream 1.0kb downstream 8966 true Chr16: 21258552-21267517 Glycine max
Glyma.16G105100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 21258552-21259551 Glycine max
Glyma.16G105100 2.0kb upstream 2.0kb upstream 9966 true Chr16: 21259552-21269517 Glycine max
Glyma.16G105100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 21267518-21269517 Glycine max
Glyma.16G105100 2.0kb downstream 2.0kb downstream 9966 true Chr16: 21257552-21267517 Glycine max
Glyma.16G105100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 21257552-21259551 Glycine max
Glyma.16G105100 5.0kb upstream 5.0kb upstream 12966 true Chr16: 21259552-21272517 Glycine max
Glyma.16G105100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 21267518-21272517 Glycine max
Glyma.16G105100 5.0kb downstream 5.0kb downstream 12966 true Chr16: 21254552-21267517 Glycine max
Glyma.16G105100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 21254552-21259551 Glycine max
Glyma.16G105100 10.0kb upstream 10.0kb upstream 17966 true Chr16: 21259552-21277517 Glycine max
Glyma.16G105100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 21267518-21277517 Glycine max
Glyma.16G105100 10.0kb downstream 10.0kb downstream 17966 true Chr16: 21249552-21267517 Glycine max
Glyma.16G105100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 21249552-21259551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122307738 5265 Fabidae View MSA
124069655 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.16606 0.0 6.62845    
cufflinks 5.59577 0.0 15.3537   High
cufflinks 1.13949 0.0 3.81385    
cufflinks 5.77765 0.0 15.8059   High
cufflinks 0.365605 0.0 1.34259    
cufflinks 0.119563 0.0 0.462577 Low Low
cufflinks 1.16752 0.0 3.89908    
cufflinks 0.736969 0.0 2.57973    
cufflinks 0.553815 0.0 1.98267    
cufflinks 3.517        
cufflinks 0.053     Low  
cufflinks 0.911        
cufflinks 0.078     Low  
cufflinks 0.012     Low Low
cufflinks 0.005     Low Low
cufflinks 4.423       High
cufflinks 0.294        
cufflinks 1.254        
cufflinks 1.702        
cufflinks 3.525        
cufflinks 0.098        
cufflinks 4.634       High
cufflinks 5.424       High
cufflinks 0.165        
cufflinks 3.558        
cufflinks 0.245        

0 Strain