Gene : Glyma.16G075000 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG4629 - Predicted mechanosensitive ion channel Genomic Order:  750
Name:  ? Glyma.16G075000 Secondary Identifier:  ? PAC:30561343
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G075000 0.5kb upstream 0.5kb upstream 14397 true Chr16: 7555629-7570025 Glycine max
Glyma.16G075000 0.5kb upstream 0.5kb upstream 500 false Chr16: 7555629-7556128 Glycine max
Glyma.16G075000 0.5kb downstream 0.5kb downstream 14397 true Chr16: 7556129-7570525 Glycine max
Glyma.16G075000 0.5kb downstream 0.5kb downstream 500 false Chr16: 7570026-7570525 Glycine max
Glyma.16G075000 1.0kb upstream 1.0kb upstream 14897 true Chr16: 7555129-7570025 Glycine max
Glyma.16G075000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7555129-7556128 Glycine max
Glyma.16G075000 1.0kb downstream 1.0kb downstream 14897 true Chr16: 7556129-7571025 Glycine max
Glyma.16G075000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7570026-7571025 Glycine max
Glyma.16G075000 2.0kb upstream 2.0kb upstream 15897 true Chr16: 7554129-7570025 Glycine max
Glyma.16G075000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7554129-7556128 Glycine max
Glyma.16G075000 2.0kb downstream 2.0kb downstream 15897 true Chr16: 7556129-7572025 Glycine max
Glyma.16G075000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7570026-7572025 Glycine max
Glyma.16G075000 5.0kb upstream 5.0kb upstream 18897 true Chr16: 7551129-7570025 Glycine max
Glyma.16G075000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7551129-7556128 Glycine max
Glyma.16G075000 5.0kb downstream 5.0kb downstream 18897 true Chr16: 7556129-7575025 Glycine max
Glyma.16G075000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7570026-7575025 Glycine max
Glyma.16G075000 10.0kb upstream 10.0kb upstream 23897 true Chr16: 7546129-7570025 Glycine max
Glyma.16G075000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7546129-7556128 Glycine max
Glyma.16G075000 10.0kb downstream 10.0kb downstream 23897 true Chr16: 7556129-7580025 Glycine max
Glyma.16G075000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7570026-7580025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122307738 5265 Fabidae View MSA
124069655 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88214 0.0 5.96612   High
cufflinks 1.01396 0.0 3.48356    
cufflinks 0.16456 0.0 0.630773 Low  
cufflinks 0.894322 0.0 3.10778    
cufflinks 0.0301142 0.0 0.123745 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0350629 0.0 0.142897 Low  
cufflinks 0.0445477 0.0 0.179655 Low  
cufflinks 0.025     Low  
cufflinks 0.003     Low Low
cufflinks 0.087     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.564        
cufflinks 0.193        
cufflinks 0.097     Low  
cufflinks 0.171        
cufflinks 0.777       High
cufflinks 0.002     Low Low
cufflinks 0.746       High
cufflinks 0.686        
cufflinks 0.004     Low Low
cufflinks 0.649        
cufflinks 0.032     Low  

0 Strain