Gene : Glyma.16G038300 G. max Wm82.a2.v1
Defline:  (1 of 11) 2.1.1.14 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase / Tetrahydropteroylglutamate-homocysteine transmethylase Genomic Order:  383
Name:  ? Glyma.16G038300 Secondary Identifier:  ? PAC:30559344
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5041 Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  
Gmax PWY-702 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G038300 0.5kb upstream 0.5kb upstream 5868 true Chr16: 3616780-3622647 Glycine max
Glyma.16G038300 0.5kb upstream 0.5kb upstream 500 false Chr16: 3616780-3617279 Glycine max
Glyma.16G038300 0.5kb downstream 0.5kb downstream 5868 true Chr16: 3617280-3623147 Glycine max
Glyma.16G038300 0.5kb downstream 0.5kb downstream 500 false Chr16: 3622648-3623147 Glycine max
Glyma.16G038300 1.0kb upstream 1.0kb upstream 6368 true Chr16: 3616280-3622647 Glycine max
Glyma.16G038300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3616280-3617279 Glycine max
Glyma.16G038300 1.0kb downstream 1.0kb downstream 6368 true Chr16: 3617280-3623647 Glycine max
Glyma.16G038300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3622648-3623647 Glycine max
Glyma.16G038300 2.0kb upstream 2.0kb upstream 7368 true Chr16: 3615280-3622647 Glycine max
Glyma.16G038300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3615280-3617279 Glycine max
Glyma.16G038300 2.0kb downstream 2.0kb downstream 7368 true Chr16: 3617280-3624647 Glycine max
Glyma.16G038300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3622648-3624647 Glycine max
Glyma.16G038300 5.0kb upstream 5.0kb upstream 10368 true Chr16: 3612280-3622647 Glycine max
Glyma.16G038300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3612280-3617279 Glycine max
Glyma.16G038300 5.0kb downstream 5.0kb downstream 10368 true Chr16: 3617280-3627647 Glycine max
Glyma.16G038300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3622648-3627647 Glycine max
Glyma.16G038300 10.0kb upstream 10.0kb upstream 15368 true Chr16: 3607280-3622647 Glycine max
Glyma.16G038300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3607280-3617279 Glycine max
Glyma.16G038300 10.0kb downstream 10.0kb downstream 15368 true Chr16: 3617280-3632647 Glycine max
Glyma.16G038300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3622648-3632647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310824 5265 Fabidae View MSA
124070174 5270 Rosid View MSA
123752458 5271 Pentapetalae View MSA
122786411 5272 Eudicot View MSA
122042081 5273 Angiosperm View MSA
121350938 5274 Embryophyte View MSA
123427513 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 130.262 0.0 1162.76 High Low
cufflinks 220.735 0.0 2948.94 High  
cufflinks 83.5427 0.0 563.173 High Low
cufflinks 637.016 0.0 24853.9 High  
cufflinks 692.894 0.0 30560.2 High  
cufflinks 1095.09 0.0 85674.7 High High
cufflinks 178.339 0.0 2044.74 High  
cufflinks 523.522 0.0 16906.3 High  
cufflinks 268.164 0.0 4379.43 High  
cufflinks 103.174     High High
cufflinks 5.563     High Low
cufflinks 19.171     High  
cufflinks 111.357     High High
cufflinks 126.533     High High
cufflinks 10.672     High Low
cufflinks 39.165     High  
cufflinks 42.53     High  
cufflinks 47.43     High  
cufflinks 49.815     High  
cufflinks 15.986     High  
cufflinks 14.736     High  
cufflinks 25.272     High  
cufflinks 38.627     High  
cufflinks 12.343     High Low
cufflinks 24.605     High  
cufflinks 33.553     High  

0 Strain