Gene : Glyma.16G046600 G. max Wm82.a2.v1
Defline:  (1 of 3) PF00153//PF13202//PF13499 - Mitochondrial carrier protein (Mito_carr) // EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7) Genomic Order:  466
Name:  ? Glyma.16G046600 Secondary Identifier:  ? PAC:30561815
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G046600 0.5kb upstream 0.5kb upstream 8166 true Chr16: 4431516-4439681 Glycine max
Glyma.16G046600 0.5kb upstream 0.5kb upstream 500 false Chr16: 4439182-4439681 Glycine max
Glyma.16G046600 0.5kb downstream 0.5kb downstream 8166 true Chr16: 4431016-4439181 Glycine max
Glyma.16G046600 0.5kb downstream 0.5kb downstream 500 false Chr16: 4431016-4431515 Glycine max
Glyma.16G046600 1.0kb upstream 1.0kb upstream 8666 true Chr16: 4431516-4440181 Glycine max
Glyma.16G046600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4439182-4440181 Glycine max
Glyma.16G046600 1.0kb downstream 1.0kb downstream 8666 true Chr16: 4430516-4439181 Glycine max
Glyma.16G046600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4430516-4431515 Glycine max
Glyma.16G046600 2.0kb upstream 2.0kb upstream 9666 true Chr16: 4431516-4441181 Glycine max
Glyma.16G046600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4439182-4441181 Glycine max
Glyma.16G046600 2.0kb downstream 2.0kb downstream 9666 true Chr16: 4429516-4439181 Glycine max
Glyma.16G046600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4429516-4431515 Glycine max
Glyma.16G046600 5.0kb upstream 5.0kb upstream 12666 true Chr16: 4431516-4444181 Glycine max
Glyma.16G046600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4439182-4444181 Glycine max
Glyma.16G046600 5.0kb downstream 5.0kb downstream 12666 true Chr16: 4426516-4439181 Glycine max
Glyma.16G046600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4426516-4431515 Glycine max
Glyma.16G046600 10.0kb upstream 10.0kb upstream 17666 true Chr16: 4431516-4449181 Glycine max
Glyma.16G046600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4439182-4449181 Glycine max
Glyma.16G046600 10.0kb downstream 10.0kb downstream 17666 true Chr16: 4421516-4439181 Glycine max
Glyma.16G046600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4421516-4431515 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304535 5265 Fabidae View MSA
124072289 5270 Rosid View MSA
123740149 5271 Pentapetalae View MSA
122790227 5272 Eudicot View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.94327 0.0 4.05316   Low
cufflinks 2.09738 0.0 8.06375    
cufflinks 2.53549 0.0 9.26988    
cufflinks 2.18605 0.0 10.5426    
cufflinks 3.79994 0.0 14.9343    
cufflinks 6.1429 0.0 23.1472   High
cufflinks 1.42626 0.0 6.11951    
cufflinks 2.18673 0.0 10.541    
cufflinks 4.497 0.0 19.6914   High
cufflinks 0.809       High
cufflinks 0.124       Low
cufflinks 0.636        
cufflinks 0.75        
cufflinks 0.746        
cufflinks 0.498        
cufflinks 0.185        
cufflinks 0.413        
cufflinks 1.203       High
cufflinks 0.627        
cufflinks 0.138       Low
cufflinks 0.142       Low
cufflinks 0.185        
cufflinks 0.569        
cufflinks 0.226        
cufflinks 0.111       Low
cufflinks 0.319        

0 Strain