Gene : Glyma.16G056100 G. max Wm82.a2.v1
Defline:  (1 of 20) PF04669 - Polysaccharide biosynthesis (Polysacc_synt_4) Genomic Order:  561
Name:  ? Glyma.16G056100 Secondary Identifier:  ? PAC:30561144
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G056100 0.5kb upstream 0.5kb upstream 1464 true Chr16: 5518430-5519893 Glycine max
Glyma.16G056100 0.5kb upstream 0.5kb upstream 500 false Chr16: 5518430-5518929 Glycine max
Glyma.16G056100 0.5kb downstream 0.5kb downstream 1464 true Chr16: 5518930-5520393 Glycine max
Glyma.16G056100 0.5kb downstream 0.5kb downstream 500 false Chr16: 5519894-5520393 Glycine max
Glyma.16G056100 1.0kb upstream 1.0kb upstream 1964 true Chr16: 5517930-5519893 Glycine max
Glyma.16G056100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5517930-5518929 Glycine max
Glyma.16G056100 1.0kb downstream 1.0kb downstream 1964 true Chr16: 5518930-5520893 Glycine max
Glyma.16G056100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5519894-5520893 Glycine max
Glyma.16G056100 2.0kb upstream 2.0kb upstream 2964 true Chr16: 5516930-5519893 Glycine max
Glyma.16G056100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5516930-5518929 Glycine max
Glyma.16G056100 2.0kb downstream 2.0kb downstream 2964 true Chr16: 5518930-5521893 Glycine max
Glyma.16G056100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5519894-5521893 Glycine max
Glyma.16G056100 5.0kb upstream 5.0kb upstream 5964 true Chr16: 5513930-5519893 Glycine max
Glyma.16G056100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5513930-5518929 Glycine max
Glyma.16G056100 5.0kb downstream 5.0kb downstream 5964 true Chr16: 5518930-5524893 Glycine max
Glyma.16G056100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5519894-5524893 Glycine max
Glyma.16G056100 10.0kb upstream 10.0kb upstream 10964 true Chr16: 5508930-5519893 Glycine max
Glyma.16G056100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5508930-5518929 Glycine max
Glyma.16G056100 10.0kb downstream 10.0kb downstream 10964 true Chr16: 5518930-5529893 Glycine max
Glyma.16G056100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5519894-5529893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296951 5265 Fabidae View MSA
124074793 5270 Rosid View MSA
123750193 5271 Pentapetalae View MSA
122793595 5272 Eudicot View MSA
122042282 5273 Angiosperm View MSA
121349069 5274 Embryophyte View MSA
123381149 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0385687 0.0 0.170717 Low Low
cufflinks 0.367026 0.0 1.42785    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.650409 0.0 2.45807    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.096        
cufflinks 0.153        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.064     Low  
cufflinks 0.626       High
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  

0 Strain