Gene : Glyma.16G004800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22908:SF66 - MIDASIN Genomic Order:  48
Name:  ? Glyma.16G004800 Secondary Identifier:  ? PAC:30560490
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G004800 0.5kb upstream 0.5kb upstream 59936 true Chr16: 268488-328423 Glycine max
Glyma.16G004800 0.5kb upstream 0.5kb upstream 500 false Chr16: 268488-268987 Glycine max
Glyma.16G004800 0.5kb downstream 0.5kb downstream 59936 true Chr16: 268988-328923 Glycine max
Glyma.16G004800 0.5kb downstream 0.5kb downstream 500 false Chr16: 328424-328923 Glycine max
Glyma.16G004800 1.0kb upstream 1.0kb upstream 60436 true Chr16: 267988-328423 Glycine max
Glyma.16G004800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 267988-268987 Glycine max
Glyma.16G004800 1.0kb downstream 1.0kb downstream 60436 true Chr16: 268988-329423 Glycine max
Glyma.16G004800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 328424-329423 Glycine max
Glyma.16G004800 2.0kb upstream 2.0kb upstream 61436 true Chr16: 266988-328423 Glycine max
Glyma.16G004800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 266988-268987 Glycine max
Glyma.16G004800 2.0kb downstream 2.0kb downstream 61436 true Chr16: 268988-330423 Glycine max
Glyma.16G004800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 328424-330423 Glycine max
Glyma.16G004800 5.0kb upstream 5.0kb upstream 64436 true Chr16: 263988-328423 Glycine max
Glyma.16G004800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 263988-268987 Glycine max
Glyma.16G004800 5.0kb downstream 5.0kb downstream 64436 true Chr16: 268988-333423 Glycine max
Glyma.16G004800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 328424-333423 Glycine max
Glyma.16G004800 10.0kb upstream 10.0kb upstream 69436 true Chr16: 258988-328423 Glycine max
Glyma.16G004800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 258988-268987 Glycine max
Glyma.16G004800 10.0kb downstream 10.0kb downstream 69436 true Chr16: 268988-338423 Glycine max
Glyma.16G004800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 328424-338423 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312498 5265 Fabidae View MSA
124062999 5270 Rosid View MSA
123740376 5271 Pentapetalae View MSA
122786065 5272 Eudicot View MSA
122048844 5273 Angiosperm View MSA
121344207 5274 Embryophyte View MSA
123425540 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.77634 0.0 18.3167   High
cufflinks 1.48787 0.0 4.52105    
cufflinks 1.881 0.0 6.41895    
cufflinks 1.89573 0.0 6.51157    
cufflinks 2.11167 0.0 6.3241    
cufflinks 0.406014 0.0 1.53742   Low
cufflinks 2.05004 0.0 7.01207    
cufflinks 1.39942 0.0 4.90677    
cufflinks 1.95936 0.0 6.72155    
cufflinks 0.117       Low
cufflinks 0.074       Low
cufflinks 0.302       High
cufflinks 0.237        
cufflinks 0.381       High
cufflinks 0.291        
cufflinks 0.19        
cufflinks 0.157        
cufflinks 0.267        
cufflinks 0.323       High
cufflinks 0.157        
cufflinks 0.13        
cufflinks 0.212        
cufflinks 0.185        
cufflinks 0.112       Low
cufflinks 0.218        
cufflinks 0.222        

0 Strain