Gene : Glyma.15G261900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2619
Name:  ? Glyma.15G261900 Secondary Identifier:  ? PAC:30498839
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax CALVIN-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G261900 0.5kb upstream 0.5kb upstream 4205 true Chr15: 49422414-49426618 Glycine max
Glyma.15G261900 0.5kb upstream 0.5kb upstream 500 false Chr15: 49422414-49422913 Glycine max
Glyma.15G261900 0.5kb downstream 0.5kb downstream 4205 true Chr15: 49422914-49427118 Glycine max
Glyma.15G261900 0.5kb downstream 0.5kb downstream 500 false Chr15: 49426619-49427118 Glycine max
Glyma.15G261900 1.0kb upstream 1.0kb upstream 4705 true Chr15: 49421914-49426618 Glycine max
Glyma.15G261900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49421914-49422913 Glycine max
Glyma.15G261900 1.0kb downstream 1.0kb downstream 4705 true Chr15: 49422914-49427618 Glycine max
Glyma.15G261900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49426619-49427618 Glycine max
Glyma.15G261900 2.0kb upstream 2.0kb upstream 5705 true Chr15: 49420914-49426618 Glycine max
Glyma.15G261900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49420914-49422913 Glycine max
Glyma.15G261900 2.0kb downstream 2.0kb downstream 5705 true Chr15: 49422914-49428618 Glycine max
Glyma.15G261900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49426619-49428618 Glycine max
Glyma.15G261900 5.0kb upstream 5.0kb upstream 8705 true Chr15: 49417914-49426618 Glycine max
Glyma.15G261900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49417914-49422913 Glycine max
Glyma.15G261900 5.0kb downstream 5.0kb downstream 8705 true Chr15: 49422914-49431618 Glycine max
Glyma.15G261900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49426619-49431618 Glycine max
Glyma.15G261900 10.0kb upstream 10.0kb upstream 13705 true Chr15: 49412914-49426618 Glycine max
Glyma.15G261900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49412914-49422913 Glycine max
Glyma.15G261900 10.0kb downstream 10.0kb downstream 13705 true Chr15: 49422914-49436618 Glycine max
Glyma.15G261900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49426619-49436618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308009 5265 Fabidae View MSA
124066937 5270 Rosid View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 210.251 0.0 1597.07 High High
cufflinks 112.113 0.0 579.459 High  
cufflinks 29.1766 0.0 90.8749 High  
cufflinks 104.559 0.0 574.11 High  
cufflinks 19.504 0.0 58.5889    
cufflinks 10.6427 0.0 32.239   Low
cufflinks 129.843 0.0 781.598 High  
cufflinks 57.5963 0.0 210.825 High  
cufflinks 9.2455 0.0 28.3245   Low
cufflinks 30.286     High  
cufflinks 0.584       Low
cufflinks 10.539     High  
cufflinks 1.484        
cufflinks 1.271        
cufflinks 1.289        
cufflinks 90.063     High High
cufflinks 0.849        
cufflinks 13.619     High  
cufflinks 30.752     High  
cufflinks 85.727     High High
cufflinks 0.66       Low
cufflinks 80.976     High High
cufflinks 59.403     High High
cufflinks 0.447       Low
cufflinks 93.799     High High
cufflinks 0.701       Low

0 Strain