Gene : Glyma.15G276000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10169:SF38 - DNA TOPOISOMERASE 2 Genomic Order:  2760
Name:  ? Glyma.15G276000 Secondary Identifier:  ? PAC:30498072
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G276000 0.5kb upstream 0.5kb upstream 7754 true Chr15: 51495263-51503016 Glycine max
Glyma.15G276000 0.5kb upstream 0.5kb upstream 500 false Chr15: 51502517-51503016 Glycine max
Glyma.15G276000 0.5kb downstream 0.5kb downstream 7754 true Chr15: 51494763-51502516 Glycine max
Glyma.15G276000 0.5kb downstream 0.5kb downstream 500 false Chr15: 51494763-51495262 Glycine max
Glyma.15G276000 1.0kb upstream 1.0kb upstream 8254 true Chr15: 51495263-51503516 Glycine max
Glyma.15G276000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 51502517-51503516 Glycine max
Glyma.15G276000 1.0kb downstream 1.0kb downstream 8254 true Chr15: 51494263-51502516 Glycine max
Glyma.15G276000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 51494263-51495262 Glycine max
Glyma.15G276000 2.0kb upstream 2.0kb upstream 9254 true Chr15: 51495263-51504516 Glycine max
Glyma.15G276000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 51502517-51504516 Glycine max
Glyma.15G276000 2.0kb downstream 2.0kb downstream 9254 true Chr15: 51493263-51502516 Glycine max
Glyma.15G276000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 51493263-51495262 Glycine max
Glyma.15G276000 5.0kb upstream 5.0kb upstream 12254 true Chr15: 51495263-51507516 Glycine max
Glyma.15G276000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 51502517-51507516 Glycine max
Glyma.15G276000 5.0kb downstream 5.0kb downstream 12254 true Chr15: 51490263-51502516 Glycine max
Glyma.15G276000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 51490263-51495262 Glycine max
Glyma.15G276000 10.0kb upstream 10.0kb upstream 17254 true Chr15: 51495263-51512516 Glycine max
Glyma.15G276000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 51502517-51512516 Glycine max
Glyma.15G276000 10.0kb downstream 10.0kb downstream 17254 true Chr15: 51485263-51502516 Glycine max
Glyma.15G276000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 51485263-51495262 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299523 5265 Fabidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101425 0.0 0.381635 Low Low
cufflinks 14.1349 0.0 39.6956   High
cufflinks 1.26593 0.0 3.73293    
cufflinks 3.78485 0.0 10.1529    
cufflinks 6.32539 0.0 16.9014    
cufflinks 2.55586 0.0 7.00881    
cufflinks 4.75336 0.0 12.6913    
cufflinks 3.92079 0.0 10.5062    
cufflinks 7.36892 0.0 19.7652    
cufflinks 6.085        
cufflinks 0.618       Low
cufflinks 4.968        
cufflinks 11.325     High  
cufflinks 12.78     High  
cufflinks 0.088       Low
cufflinks 21.484     High  
cufflinks 1.887        
cufflinks 3.6        
cufflinks 26.811     High High
cufflinks 15.249     High  
cufflinks 1.324        
cufflinks 19.206     High  
cufflinks 20.986     High  
cufflinks 0.617       Low
cufflinks 15.354     High  
cufflinks 2.438        

0 Strain