Gene : Glyma.15G178100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32378:SF9 - KERATIN-ASSOCIATED PROTEIN 29-1 Genomic Order:  1781
Name:  ? Glyma.15G178100 Secondary Identifier:  ? PAC:30499392
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G178100 0.5kb upstream 0.5kb upstream 3836 true Chr15: 16972283-16976118 Glycine max
Glyma.15G178100 0.5kb upstream 0.5kb upstream 500 false Chr15: 16975619-16976118 Glycine max
Glyma.15G178100 0.5kb downstream 0.5kb downstream 3836 true Chr15: 16971783-16975618 Glycine max
Glyma.15G178100 0.5kb downstream 0.5kb downstream 500 false Chr15: 16971783-16972282 Glycine max
Glyma.15G178100 1.0kb upstream 1.0kb upstream 4336 true Chr15: 16972283-16976618 Glycine max
Glyma.15G178100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 16975619-16976618 Glycine max
Glyma.15G178100 1.0kb downstream 1.0kb downstream 4336 true Chr15: 16971283-16975618 Glycine max
Glyma.15G178100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 16971283-16972282 Glycine max
Glyma.15G178100 2.0kb upstream 2.0kb upstream 5336 true Chr15: 16972283-16977618 Glycine max
Glyma.15G178100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 16975619-16977618 Glycine max
Glyma.15G178100 2.0kb downstream 2.0kb downstream 5336 true Chr15: 16970283-16975618 Glycine max
Glyma.15G178100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 16970283-16972282 Glycine max
Glyma.15G178100 5.0kb upstream 5.0kb upstream 8336 true Chr15: 16972283-16980618 Glycine max
Glyma.15G178100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 16975619-16980618 Glycine max
Glyma.15G178100 5.0kb downstream 5.0kb downstream 8336 true Chr15: 16967283-16975618 Glycine max
Glyma.15G178100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 16967283-16972282 Glycine max
Glyma.15G178100 10.0kb upstream 10.0kb upstream 13336 true Chr15: 16972283-16985618 Glycine max
Glyma.15G178100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 16975619-16985618 Glycine max
Glyma.15G178100 10.0kb downstream 10.0kb downstream 13336 true Chr15: 16962283-16975618 Glycine max
Glyma.15G178100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 16962283-16972282 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026325 5273 Angiosperm View MSA
122250563 5265 Fabidae View MSA
124071651 5270 Rosid View MSA
123750452 5271 Pentapetalae View MSA
122787622 5272 Eudicot View MSA
121296281 5274 Embryophyte View MSA
123334475 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.708551 0.0 5.85366   High
cufflinks 0.151047 0.0 0.606857 Low  
cufflinks 0.216694 0.0 0.852857    
cufflinks 0.0748506 0.0 0.308942 Low  
cufflinks 0.246474 0.0 0.965468 Low  
cufflinks 0.0387792 0.0 0.170184 Low Low
cufflinks 0.173514 0.0 0.689519 Low  
cufflinks 0.0922762 0.0 0.376334 Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.009     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.004     Low Low
cufflinks 0.113     Low High
cufflinks 0.093     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.002     Low Low

0 Strain