Gene : Glyma.15G129800 G. max Wm82.a2.v1
Defline:  (1 of 4) PF01599 - Ribosomal protein S27a (Ribosomal_S27) Genomic Order:  1298
Name:  ? Glyma.15G129800 Secondary Identifier:  ? PAC:30497077
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G129800 0.5kb upstream 0.5kb upstream 1615 true Chr15: 10429957-10431571 Glycine max
Glyma.15G129800 0.5kb upstream 0.5kb upstream 500 false Chr15: 10429957-10430456 Glycine max
Glyma.15G129800 0.5kb downstream 0.5kb downstream 1615 true Chr15: 10430457-10432071 Glycine max
Glyma.15G129800 0.5kb downstream 0.5kb downstream 500 false Chr15: 10431572-10432071 Glycine max
Glyma.15G129800 1.0kb upstream 1.0kb upstream 2115 true Chr15: 10429457-10431571 Glycine max
Glyma.15G129800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10429457-10430456 Glycine max
Glyma.15G129800 1.0kb downstream 1.0kb downstream 2115 true Chr15: 10430457-10432571 Glycine max
Glyma.15G129800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10431572-10432571 Glycine max
Glyma.15G129800 2.0kb upstream 2.0kb upstream 3115 true Chr15: 10428457-10431571 Glycine max
Glyma.15G129800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10428457-10430456 Glycine max
Glyma.15G129800 2.0kb downstream 2.0kb downstream 3115 true Chr15: 10430457-10433571 Glycine max
Glyma.15G129800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10431572-10433571 Glycine max
Glyma.15G129800 5.0kb upstream 5.0kb upstream 6115 true Chr15: 10425457-10431571 Glycine max
Glyma.15G129800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10425457-10430456 Glycine max
Glyma.15G129800 5.0kb downstream 5.0kb downstream 6115 true Chr15: 10430457-10436571 Glycine max
Glyma.15G129800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10431572-10436571 Glycine max
Glyma.15G129800 10.0kb upstream 10.0kb upstream 11115 true Chr15: 10420457-10431571 Glycine max
Glyma.15G129800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10420457-10430456 Glycine max
Glyma.15G129800 10.0kb downstream 10.0kb downstream 11115 true Chr15: 10430457-10441571 Glycine max
Glyma.15G129800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10431572-10441571 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306613 5265 Fabidae View MSA
124071954 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.9447 0.0 157.44 High  
cufflinks 87.4623 0.0 246.135 High  
cufflinks 32.0723 0.0 85.5717 High Low
cufflinks 44.3575 0.0 118.997 High Low
cufflinks 133.373 0.0 400.574 High High
cufflinks 107.573 0.0 311.868 High  
cufflinks 164.724 0.0 510.084 High High
cufflinks 64.871 0.0 177.74 High  
cufflinks 81.8065 0.0 229.243 High  
cufflinks 41.228     High  
cufflinks 10.501     High Low
cufflinks 29.513     High  
cufflinks 109.347     High High
cufflinks 166.716     High High
cufflinks 10.072     High Low
cufflinks 38.371     High  
cufflinks 25.868     High  
cufflinks 32.636     High  
cufflinks 67.775     High High
cufflinks 26.239     High  
cufflinks 18.235     High  
cufflinks 29.366     High  
cufflinks 49.428     High  
cufflinks 12.037     High Low
cufflinks 33.464     High  
cufflinks 23.813     High  

0 Strain